RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 FOXQ1Q9C009 403 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 OR2AG1Q9H205 316 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 TFB2MQ9H5Q4 396 aaKnown RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 LMAN1LQ9HAT1 526 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 MBNL1Q9NR56 388 aaKnown RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 THAP1Q9NVV9 213 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 SORCS3Q9UPU3 1222 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 NCKAP1Q9Y2A7 1128 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 F8W8V4 182 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 HGSO14964 777 aaPredicted RBP12.27□□□□□ -0.45
CHMP3-204ENST00000409727 MAGEC1O60732 1142 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 RNGTTO60942 597 aaKnown RBP12.27□□□□□ -0.45
CHMP3-204ENST00000409727 SMIM24O75264 130 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 GFAPP14136 432 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 GABRG2P18507 467 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 DGKAP23743 735 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 GRK2P25098 689 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 RGS4P49798 205 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 RPS21P63220 83 aaKnown RBP12.27□□□□□ -0.45
CHMP3-204ENST00000409727 OCRLQ01968 901 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 DPTQ07507 201 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 SGCGQ13326 291 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 FGL2Q14314 439 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 ZSCAN26Q16670 478 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 PFKFB4Q16877 469 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 WSCD2Q2TBF2 565 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 DOK6Q6PKX4 331 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 TRIM67Q6ZTA4 783 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 ZNF765Q7L2R6 523 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 SIX5Q8N196 739 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 MYO1HQ8N1T3 1032 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 CCDC197Q8NCU1 140 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 RFWD2Q8NHY2 731 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 ELMO1Q92556 727 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 FUBP1Q96AE4 644 aaKnown RBP12.27□□□□□ -0.45
CHMP3-204ENST00000409727 TMEM237Q96Q45 408 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 FZD3Q9NPG1 666 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 C2orf42Q9NWW7 574 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 NCKIPSDQ9NZQ3 722 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 TMEM98Q9Y2Y6 226 aa12.27□□□□□ -0.45
CHMP3-204ENST00000409727 TMEM202A6NGA9 273 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 SGTAO43765 313 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 KERAO60938 352 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 IPO13O94829 963 aaKnown RBP12.26□□□□□ -0.45
CHMP3-204ENST00000409727 CDK14O94921 469 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 CHRNGP07510 517 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 TROVE2P10155 538 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHMP3-204ENST00000409727 PPP2CBP62714 309 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 PPP2CAP67775 309 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 INPP5AQ14642 412 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 IRF4Q15306 451 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 TTLL9Q3SXZ7 439 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 CFAP157Q5JU67 520 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 PNCKQ6P2M8 343 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 TMEM220Q6QAJ8 160 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 HEATR4Q86WZ0 1026 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 CRLF3Q8IUI8 442 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 PTGR2Q8N8N7 351 aaPredicted RBP12.26□□□□□ -0.45
CHMP3-204ENST00000409727 PPP4R1Q8TF05 950 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 GRAMD1AQ96CP6 724 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 HIC2Q96JB3 615 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 C7orf26Q96N11 449 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 ATOH8Q96SQ7 321 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 SORT1Q99523 831 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 TRIM55Q9BYV6 548 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 LATS2Q9NRM7 1088 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 KCTD5Q9NXV2 234 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 DNAJC16Q9Y2G8 782 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 OR1A2Q9Y585 309 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 PIKFYVEQ9Y2I7 2098 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 TRPM6Q9BX84 2022 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 NUMA1Q14980 2115 aa12.26□□□□□ -0.45
CHMP3-204ENST00000409727 A0A0G2JND7 137 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 LRRC14BA6NHZ5 514 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 STK25O00506 426 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 SLC31A1O15431 190 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 H2AFYO75367 372 aaKnown RBP12.25□□□□□ -0.45
CHMP3-204ENST00000409727 TPBGLP0DKB5 382 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 AOAHP28039 575 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ACSL1P33121 698 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 TPMTP51580 245 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 PRKAA2P54646 552 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 PLA2G4EQ3MJ16 856 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 HSF5Q4G112 596 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ANO7Q6IWH7 933 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 CRTC3Q6UUV7 619 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 FRA10AC1Q70Z53 315 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ADGRG6Q86SQ4 1221 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 GPSM1Q86YR5 675 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 TRAPPC5Q8IUR0 188 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 VRK3Q8IV63 474 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ANKS4BQ8N8V4 417 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 RHEBL1Q8TAI7 183 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 LGR4Q9BXB1 951 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 PNPOQ9NVS9 261 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ATXN10Q9UBB4 475 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ADAMTS6Q9UKP5 1117 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 SCML1Q9UN30 329 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 PRKAB1Q9Y478 270 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 FAM170BA6NMN3 283 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms