RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 GPR78Q96P69 363 aa16.58■□□□□ 0.24
SSB-202ENST00000409333 CNOT10Q9H9A5 744 aaKnown RBP16.58■□□□□ 0.24
SSB-202ENST00000409333 SPATS2LQ9NUQ6 558 aaKnown RBP16.58■□□□□ 0.24
SSB-202ENST00000409333 RUVBL2Q9Y230 463 aaKnown RBP16.58■□□□□ 0.24
SSB-202ENST00000409333 SLCO1B1Q9Y6L6 691 aa16.58■□□□□ 0.24
SSB-202ENST00000409333 TMEM202A6NGA9 273 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 QSOX1O00391 747 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 TM9SF1O15321 606 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 LAMTOR5O43504 91 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 VEGFDO43915 354 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 TSPAN12O95859 305 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 GSTA1P08263 222 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 LTA4HP09960 611 aaKnown RBP16.57■□□□□ 0.24
SSB-202ENST00000409333 COL6A2P12110 1019 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 CCR7P32248 378 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 FNTBP49356 437 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 WDR4P57081 412 aaKnown RBP16.57■□□□□ 0.24
SSB-202ENST00000409333 IRX4P78413 519 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 GTF2H3Q13889 308 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 INSCQ1MX18 579 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 LVRNQ6Q4G3 990 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 CRTC3Q6UUV7 619 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 OTOAQ7RTW8 1153 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 CCDC91Q7Z6B0 441 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 MAML2Q8IZL2 1156 aaPredicted RBP16.57■□□□□ 0.24
SSB-202ENST00000409333 ZBTB2Q8N680 514 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 EEF1AKMT1Q8WVE0 214 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 INPP5DQ92835 1189 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 EPHX3Q9H6B9 360 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 SYTL2Q9HCH5 934 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 NKIRAS1Q9NYS0 192 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 FAM8A1Q9UBU6 413 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 TSR3Q9UJK0 312 aaKnown RBP16.57■□□□□ 0.24
SSB-202ENST00000409333 GRID1Q9ULK0 1009 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 PRKAB1Q9Y478 270 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 SDK1Q7Z5N4 2213 aa16.57■□□□□ 0.24
SSB-202ENST00000409333 A0A1W2PPC4 97 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 PRAMEF26H0Y7S4 382 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 MAGEC1O60732 1142 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 FTH1P02794 183 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 AOAHP28039 575 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 PBLDP30039 288 aaPredicted RBP16.56■□□□□ 0.24
SSB-202ENST00000409333 HOXA6P31267 233 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 SLC26A3P40879 764 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 ETV4P43268 484 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 BOP1Q14137 746 aaKnown RBP16.56■□□□□ 0.24
SSB-202ENST00000409333 BCL7AQ4VC05 210 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 TPRG1LQ5T0D9 272 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 LRRC8EQ6NSJ5 796 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 C1orf210Q8IVY1 113 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 LINGO1Q96FE5 620 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 TSNARE1Q96NA8 513 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 LATS2Q9NRM7 1088 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 DMTF1Q9Y222 760 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 METTL12A8MUP2 240 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 CACNB4O00305 520 aaPredicted RBP16.56■□□□□ 0.24
SSB-202ENST00000409333 CHUKO15111 745 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 NUAK1O60285 661 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 FUCA1P04066 466 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 CD1DP15813 335 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 PFN3P60673 137 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 FAM83EQ2M2I3 478 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 PLA2G4EQ3MJ16 856 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 ACSBG2Q5FVE4 666 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 FSTL5Q8N475 847 aaPredicted RBP16.56■□□□□ 0.24
SSB-202ENST00000409333 ARMC2Q8NEN0 867 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 CADM4Q8NFZ8 388 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 ELMO1Q92556 727 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 CCM2Q9BSQ5 444 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 TSSK1BQ9BXA7 367 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 MRPL40Q9NQ50 206 aaKnown RBP16.56■□□□□ 0.24
SSB-202ENST00000409333 GULP1Q9UBP9 304 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 IKZF3Q9UKT9 509 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 HS3ST3A1Q9Y663 406 aa16.56■□□□□ 0.24
SSB-202ENST00000409333 CCDC163A0A0D9SF12 145 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 TK2O00142 265 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 ZBTB14O43829 449 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 PLIN3O60664 434 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 PROCP04070 461 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 CEACAM5P06731 702 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 KIAA1024LP59773 190 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 IL2P60568 153 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 GUCY1A3Q02108 690 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 SEPT7Q16181 437 aaKnown RBP16.55■□□□□ 0.24
SSB-202ENST00000409333 TSNAXIP1Q2TAA8 658 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 AGAP9Q5VTM2 703 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 TTC19Q6DKK2 380 aaPredicted RBP16.55■□□□□ 0.24
SSB-202ENST00000409333 C11orf96Q7Z7L8 435 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 LCA5Q86VQ0 697 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 NKAPQ8N5F7 415 aaKnown RBP16.55■□□□□ 0.24
SSB-202ENST00000409333 LILRA3Q8N6C8 439 aaPredicted RBP16.55■□□□□ 0.24
SSB-202ENST00000409333 PTERQ96BW5 349 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 SCYL1Q96KG9 808 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 PAIP2Q9BPZ3 127 aaKnown RBP16.55■□□□□ 0.24
SSB-202ENST00000409333 PCED1AQ9H1Q7 454 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 NMRAL1Q9HBL8 299 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 INTS9Q9NV88 658 aaKnown RBP16.55■□□□□ 0.24
SSB-202ENST00000409333 XPR1Q9UBH6 696 aa16.55■□□□□ 0.24
SSB-202ENST00000409333 EIF2B4Q9UI10 523 aaKnown RBP16.55■□□□□ 0.24
SSB-202ENST00000409333 GPR34Q9UPC5 381 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms