RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SCML1Q9UN30 329 aa4.96□□□□□ -1.62
SCN3A-203ENST00000409101 EFR3BQ9Y2G0 817 aa4.96□□□□□ -1.62
SCN3A-203ENST00000409101 C4AP0C0L4 1744 aa4.96□□□□□ -1.62
SCN3A-203ENST00000409101 C2orf78A6NCI8 922 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 C2orf74A8MZ97 194 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RFXANKO14593 260 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CEBPBP17676 345 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 C5AR1P21730 350 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SOX6P35712 828 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ACVRL1P37023 503 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 MARCKSL1P49006 195 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 HCAR3P49019 387 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CASP9P55211 416 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 POLE2P56282 527 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ITIH4Q14624 930 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CLLU1OSQ5K130 101 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RTP2Q5QGT7 225 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 LRRC66Q68CR7 880 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 NIPAL1Q6NVV3 410 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 OXR1Q8N573 874 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 AADATQ8N5Z0 425 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 WDR36Q8NI36 951 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CAVIN3Q969G5 261 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SMOQ99835 787 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 TLR10Q9BXR5 811 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RIBC2Q9H4K1 309 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 LRTM1Q9HBL6 345 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 KLHL1Q9NR64 748 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SERINC1Q9NRX5 453 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 TMEM248Q9NWD8 314 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 APOBEC3BQ9UH17 382 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SIT1Q9Y3P8 196 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 NOX1Q9Y5S8 564 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 DGKBQ9Y6T7 804 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 NWD2Q9ULI1 1742 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 FSCN2O14926 492 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 NDUFS4O43181 175 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 IFNGP01579 166 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ANXA4P09525 319 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 BMP7P18075 431 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 FASP25445 335 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RABIFP47224 123 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ATXN1P54253 815 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 UGT2B15P54855 530 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 JAM2P57087 298 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ACTR3P61158 418 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 HNRNPKP61978 463 aaKnown RBP eCLIP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RPS15P62841 145 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 IL5RAQ01344 420 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 LMAN2Q12907 356 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CHIT1Q13231 466 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SNTA1Q13424 505 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 EIF4HQ15056 248 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SPDYCQ5MJ68 293 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 GALNT18Q6P9A2 607 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 LDB1Q86U70 411 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 MAFAQ8NHW3 353 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF516Q92618 1163 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 OXNAD1Q96HP4 312 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 OR52E6Q96RD3 313 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 APOL4Q9BPW4 351 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 BDH2Q9BUT1 245 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 TTYH3Q9C0H2 523 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CHRAC1Q9NRG0 131 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CFL2Q9Y281 166 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 COPG1Q9Y678 874 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CCT8L1PA6NM43 557 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 OR5K4A6NMS3 321 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 TMX2-CTNND1H3BSU7 103 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 MYL12BO14950 172 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 LEFTY1O75610 366 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 POP7O75817 140 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 KLHL18O94889 574 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 LATS1O95835 1130 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ABHD2P08910 425 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 TYRP1P17643 537 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 UGT1A1P22309 533 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SLC6A2P23975 617 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 UGT1A5P35504 534 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ARCN1P48444 511 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 PRR5P85299 388 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 PTSQ03393 145 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SEMA5AQ13591 1074 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SLC1A5Q15758 541 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 TOR1AIP1Q5JTV8 583 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RPTNQ6XPR3 784 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 GCNT7Q6ZNI0 430 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SPATA19Q7Z5L4 167 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 MRPL10Q7Z7H8 261 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF605Q86T29 641 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ART4Q93070 314 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ZBED3Q96IU2 234 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 LRIG1Q96JA1 1093 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RNF145Q96MT1 663 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF641Q96N77 438 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 GFM1Q96RP9 751 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 B3GAT2Q9NPZ5 323 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 KLRF1Q9NZS2 232 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RGPD1P0DJD0 1748 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 A0A1W2PQU0 124 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms