RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 CASRP41180 1078 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 CCR10P46092 362 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 ARF3P61204 181 aaPredicted RBP11.93□□□□□ -0.5
SMCR8-201ENST00000406438 ARF1P84077 181 aaKnown RBP11.93□□□□□ -0.5
SMCR8-201ENST00000406438 FMO1Q01740 532 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 E2F2Q14209 437 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 DEFB115Q30KQ5 88 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 LDLRAP1Q5SW96 308 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 ARMCX6Q7L4S7 300 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 ADGRG6Q86SQ4 1221 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 GPATCH1Q9BRR8 931 aaKnown RBP11.93□□□□□ -0.5
SMCR8-201ENST00000406438 NMUR1Q9HB89 426 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 ETAA1Q9NY74 926 aa11.93□□□□□ -0.5
SMCR8-201ENST00000406438 CORO1CQ9ULV4 474 aaPredicted RBP11.93□□□□□ -0.5
SMCR8-201ENST00000406438 NT5C1B-RDH14C9J2C7 533 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 STBD1O95210 358 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ZBTB11O95625 1053 aaPredicted RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 COL6A2P12110 1019 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ZNF662Q6ZS27 426 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 BBS12Q6ZW61 710 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 SPPL2BQ8TCT7 592 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 TWIST2Q8WVJ9 160 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 TESCQ96BS2 214 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 DDX4Q9NQI0 724 aaKnown RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 CAPN14A8MX76 684 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 UGT2B4P06133 528 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 LAG3P18627 525 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 SLC9B1Q4ZJI4 515 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 AAGABQ6PD74 315 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 PQLC1Q8N2U9 271 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 C11orf65Q8NCR3 313 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ZNF548Q8NEK5 533 aaPredicted RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 DIRAS2Q96HU8 199 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 DPEP2Q9H4A9 486 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ATXN10Q9UBB4 475 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 TMEM131LA2VDJ0 1609 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 PEAK1Q9H792 1746 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 CPSF4LA6NMK7 179 aaKnown RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 NADKO95544 446 aaPredicted RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 CYP17A1P05093 508 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ATP5A1P25705 553 aaKnown RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ARL3P36405 182 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 MECP2P51608 486 aaKnown RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 TAF10Q12962 218 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 CRYBG2Q8N1P7 616 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ALG2Q9H553 416 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 MAN2B2Q9Y2E5 1009 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 MRPS17Q9Y2R5 130 aaKnown RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 NOX1Q9Y5S8 564 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 B3GALT2O43825 422 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 IFNW1P05000 195 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 GRM5P41594 1212 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 BLKP51451 505 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 NRG1Q02297 640 aaPredicted RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 HSPB3Q12988 150 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 SLC5A9Q2M3M2 681 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 RNASEH2BQ5TBB1 312 aaKnown RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 CHST9Q7L1S5 443 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 COX18Q8N8Q8 333 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 INO80EQ8NBZ0 244 aaPredicted RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 HTRA1Q92743 480 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 COPS5Q92905 334 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 PRICKLE1Q96MT3 831 aaPredicted RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 TSSK3Q96PN8 268 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ACP6Q9NPH0 428 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 INTS10Q9NVR2 710 aaKnown RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 KRT36O76013 467 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 PRAMEF1O95521 474 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 GRSF1Q12849 480 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ITGA7Q13683 1181 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 TIGD2Q4W5G0 525 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 DUPD1Q68J44 220 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 FZD1Q9UP38 647 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ENTPD5O75356 428 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 NME6O75414 186 aaPredicted RBP11.92□□□□□ -0.5
SMCR8-201ENST00000406438 FOSL2P15408 326 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ITIH1P19827 911 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 AKR1D1P51857 326 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 NAE1Q13564 534 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 SMARCD3Q6STE5 483 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 ZNF567Q8N184 647 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 LCN9Q8WX39 176 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 BLOC1S4Q9NUP1 217 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 NUDT4Q9NZJ9 180 aa11.92□□□□□ -0.5
SMCR8-201ENST00000406438 VSTM5A8MXK1 200 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 GSC2O15499 205 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 FFAR2O15552 330 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 KCNJ2P63252 427 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 TXNL4AP83876 142 aaKnown RBP11.91□□□□□ -0.5
SMCR8-201ENST00000406438 ZNF311Q5JNZ3 666 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 RALGPS2Q86X27 583 aaPredicted RBP11.91□□□□□ -0.5
SMCR8-201ENST00000406438 GAL3ST4Q96RP7 486 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 GLOD4Q9HC38 313 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 MSI1O43347 362 aaKnown RBP11.91□□□□□ -0.5
SMCR8-201ENST00000406438 CDK14O94921 469 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 NDST3O95803 873 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 CD2P06729 351 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 ZNF3P17036 446 aa11.91□□□□□ -0.5
SMCR8-201ENST00000406438 ACVR2AP27037 513 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms