RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 STC2O76061 302 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 C7P10643 843 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 PKMP14618 531 aaKnown RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 RANBP1P43487 201 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 CLCN4P51793 760 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 EEFSECP57772 596 aaKnown RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 RAD51Q06609 339 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 MTA1Q13330 715 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 NFYCQ13952 458 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 ABRAXAS2Q15018 415 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 CYP51A1Q16850 503 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 RFTN2Q52LD8 501 aaPredicted RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 C1QTNF12Q5T7M4 302 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 NCEH1Q6PIU2 408 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 CAMK1DQ8IU85 385 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 ADAMTS19Q8TE59 1207 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 KCNJ9Q92806 393 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 HGH1Q9BTY7 390 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 TNKS2Q9H2K2 1166 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 SYTL2Q9HCH5 934 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 CHD7Q9P2D1 2997 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 DNMT3BQ9UBC3 853 aaKnown RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 UBA2Q9UBT2 640 aaPredicted RBP9.72□□□□□ -0.85
MSH2-202ENST00000406134 SEPT3Q9UH03 358 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 FBXO10Q9UK96 956 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 PCDHGA11Q9Y5H2 935 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 RAI2Q9Y5P3 530 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 PRSS21Q9Y6M0 314 aa9.72□□□□□ -0.85
MSH2-202ENST00000406134 FAM234BA2RU67 622 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 NT5C1B-RDH14C9J2C7 533 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 F5H5T6 163 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 INPP4BO15327 924 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 B4GAT1O43505 415 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 ENO2P09104 434 aaPredicted RBP9.71□□□□□ -0.85
MSH2-202ENST00000406134 G6PDP11413 515 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 PSMA4P25789 261 aaKnown RBP9.71□□□□□ -0.85
MSH2-202ENST00000406134 ACLYP53396 1101 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 PCBP2Q15366 365 aaKnown RBP eCLIP9.71□□□□□ -0.855e-9■■■■■ 75.5
MSH2-202ENST00000406134 FUT11Q495W5 492 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 XAF1Q6GPH4 301 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 GOLGA7Q7Z5G4 137 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 ALG14Q96F25 216 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 ZNF583Q96ND8 569 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 BOCQ9BWV1 1114 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 SLC25A37Q9NYZ2 338 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 KIF26AQ9ULI4 1882 aaPredicted RBP9.71□□□□□ -0.85
MSH2-202ENST00000406134 ZNF840PA6NDX5 716 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 SNAP91O60641 907 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 C1QCP02747 245 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 HTR1AP08908 422 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 HSPA8P11142 646 aaKnown RBP9.71□□□□□ -0.85
MSH2-202ENST00000406134 PRKAR2AP13861 404 aaKnown RBP9.71□□□□□ -0.85
MSH2-202ENST00000406134 EPORP19235 508 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 FASP25445 335 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 DCKP27707 260 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 ARPP19P56211 112 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 ILF2Q12905 390 aaKnown RBP9.71□□□□□ -0.85
MSH2-202ENST00000406134 LINGO4Q6UY18 593 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 LPCAT2Q7L5N7 544 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 CHST15Q7LFX5 561 aaPredicted RBP9.71□□□□□ -0.85
MSH2-202ENST00000406134 TMEM150AQ86TG1 271 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 DENND1CQ8IV53 801 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 RNF168Q8IYW5 571 aaPredicted RBP9.71□□□□□ -0.85
MSH2-202ENST00000406134 CDYL2Q8N8U2 506 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 LPCAT1Q8NF37 534 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 C12orf43Q96C57 262 aaKnown RBP9.71□□□□□ -0.85
MSH2-202ENST00000406134 DTNBP1Q96EV8 351 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 KCTD14Q9BQ13 255 aaPredicted RBP9.71□□□□□ -0.85
MSH2-202ENST00000406134 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.71□□□□□ -0.85
MSH2-202ENST00000406134 GKN1Q9NS71 199 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 IL17CQ9P0M4 197 aa9.71□□□□□ -0.85
MSH2-202ENST00000406134 TRBV5-3A0A0A0MS03 114 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 CCDC154A6NI56 674 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 H3BMQ9 156 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 SEC24AO95486 1093 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 CPNE6O95741 557 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 YAP1P46937 504 aaKnown RBP9.71□□□□□ -0.86
MSH2-202ENST00000406134 DGKQP52824 942 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 MTPNP58546 118 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 RAB39AQ14964 217 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 ZBED5Q49AG3 693 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 MFSD14CQ5VZR4 134 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 FUT10Q6P4F1 479 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 TXNDC11Q6PKC3 985 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 GPRIN3Q6ZVF9 776 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 RAB44Q7Z6P3 723 aaPredicted RBP9.71□□□□□ -0.86
MSH2-202ENST00000406134 RALGPS2Q86X27 583 aaPredicted RBP9.71□□□□□ -0.86
MSH2-202ENST00000406134 NKAPQ8N5F7 415 aaKnown RBP9.71□□□□□ -0.86
MSH2-202ENST00000406134 OR4F6Q8NGB9 312 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 SEPT8Q92599 483 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 PDLIM5Q96HC4 596 aaKnown RBP9.71□□□□□ -0.86
MSH2-202ENST00000406134 COG8Q96MW5 612 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 CINPQ9BW66 212 aaPredicted RBP9.71□□□□□ -0.86
MSH2-202ENST00000406134 MUC13Q9H3R2 512 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 PIF1Q9H611 641 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 FARSBQ9NSD9 589 aaKnown RBP9.71□□□□□ -0.86
MSH2-202ENST00000406134 GID8Q9NWU2 228 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 COMMD8Q9NX08 183 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 VAPAQ9P0L0 249 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 PTBP2Q9UKA9 531 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms