RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ACSS1Q9NUB1 689 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 OCIAD1Q9NX40 245 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 FBXL17Q9UF56 701 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 TTC7AQ9ULT0 858 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 PCDHGB4Q9UN71 923 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 PA2G4Q9UQ80 394 aaKnown RBP4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 CLIC4Q9Y696 253 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 LTBP1Q14766 1721 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 C10orf71Q711Q0 1435 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 MROH5Q6ZUA9 1318 aa4.96□□□□□ -1.62
HMGB3P19-201ENST00000403971 PSME4Q14997 1843 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 DOCK2Q92608 1830 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 FER1L6Q2WGJ9 1857 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 IGLV5-52A0A0A0MRZ9 124 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 CPED1A4D0V7 1026 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 KCNJ13O60928 360 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 JRKO75564 520 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 BBOX1O75936 387 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 KCNK5O95279 499 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 NTN1O95631 604 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 EGFP01133 1207 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 ALPLP05186 524 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 RB1P06400 928 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 ACAA1P09110 424 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 PORP16435 677 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 ALDH1B1P30837 517 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 ACSL1P33121 698 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 PSMB10P40306 273 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 CAMPP49913 170 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 POLGP54098 1239 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 RPS8P62241 208 aaKnown RBP4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 PSMC6P62333 389 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 IKQ13123 557 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 GRAPQ13588 217 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 PDE1CQ14123 709 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 WTAPQ15007 396 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 PLCB4Q15147 1175 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 RILPL1Q5EBL4 403 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 PPP6R3Q5H9R7 873 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 TMEM198Q66K66 360 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 JADE1Q6IE81 842 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 C8orf82Q6P1X6 216 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 WDR73Q6P4I2 378 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 CFAP77Q6ZQR2 320 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 CLIP4Q8N3C7 705 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 OR2AK2Q8NG84 335 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 HMGCLL1Q8TB92 370 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 GRAPLQ8TC17 118 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 TMED6Q8WW62 240 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 GRAMD2BQ96HH9 432 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 HARBI1Q96MB7 349 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 OR2A14Q96R47 310 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 GAD1Q99259 594 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 PIGMQ9H3S5 423 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 PLK3Q9H4B4 646 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 COPG2Q9UBF2 871 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 SWAP70Q9UH65 585 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 NENFQ9UMX5 172 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 COL4A1P02462 1669 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 DICER1Q9UPY3 1922 aaKnown RBP4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 TTC41PQ6P2S7 1318 aa4.95□□□□□ -1.62
HMGB3P19-201ENST00000403971 A0A1W2PQ09 198 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 K7ENM7 598 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 SCAMP1O15126 338 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 PLRG1O43660 514 aaKnown RBP4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 GLUD1P00367 558 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 CSH1P0DML2 217 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 CSH2P0DML3 217 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 ZNF12P17014 697 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 GCH1P30793 250 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 GLUD2P49448 558 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 PDLIM4P50479 330 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 SNX16P57768 344 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 DSC1Q08554 894 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 CHAF1BQ13112 559 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 ACVR2BQ13705 512 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 ADIPOQQ15848 244 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 AMZ1Q400G9 498 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 SETMARQ53H47 684 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 XKR9Q5GH70 373 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 PMS2CLQ68D20 193 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 ZNF280DQ6N043 979 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 C16orf54Q6UWD8 224 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 CRELD2Q6UXH1 353 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 TICAM1Q8IUC6 712 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 TEX11Q8IYF3 940 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 OR8K5Q8NH50 307 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 SGCDQ92629 289 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 NEUROG1Q92886 237 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 RHBDF1Q96CC6 855 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 SEPT5Q99719 369 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 CENPOQ9BU64 300 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 ANKRD2Q9GZV1 360 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 SIL1Q9H173 461 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 WDR26Q9H7D7 661 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 C17orf75Q9HAS0 396 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 NSMCE4AQ9NXX6 385 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 OGFRQ9NZT2 677 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 TNFRSF18Q9Y5U5 241 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 SNX9Q9Y5X1 595 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms