RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 KPNA5O15131 536 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 VEGFDO43915 354 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 LILRB5O75023 590 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 PAK4O96013 591 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 CBSLP0DN79 551 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 FGF3P11487 239 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 BGNP21810 368 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 CBSP35520 551 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 KCNC1P48547 511 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 CTSCP53634 463 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 CDK3Q00526 305 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 ZNF648Q5T619 568 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 FAM124AQ86V42 546 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 C10orf107Q8IVU9 208 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 TSTD1Q8NFU3 115 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 LINGO1Q96FE5 620 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 LENG8Q96PV6 779 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 ATOH8Q96SQ7 321 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 TSSK1BQ9BXA7 367 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 FAM126AQ9BYI3 521 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 UNKQ9C0B0 810 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 BTBD1Q9H0C5 482 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 SARS2Q9NP81 518 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 MBNL1Q9NR56 388 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 LRP4O75096 1905 aa19.19■□□□□ 0.66
PDLIM2-205ENST00000397761 LATO43561 262 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 FTH1P02794 183 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 MYL2P10916 166 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 DRD4P21917 467 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 KCNA4P22459 653 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 DGKAP23743 735 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 CCR7P32248 378 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 PRKAA2P54646 552 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 TTLL9Q3SXZ7 439 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 ZNF658BQ4V348 819 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 CES4AQ5XG92 561 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 DET1Q7L5Y6 550 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 OTOAQ7RTW8 1153 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 HEATR4Q86WZ0 1026 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 LRRC34Q8IZ02 419 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 DENND6BQ8NEG7 585 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 ZNF514Q96K75 400 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 ALG9Q9H6U8 611 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 IKZF3Q9UKT9 509 aa19.18■□□□□ 0.66
PDLIM2-205ENST00000397761 RAD51BO15315 384 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 DLX3O60479 287 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 FAM107AO95990 144 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 PCCBP05166 539 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 ENO3P13929 434 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 ITGB6P18564 788 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 ATP5F1P24539 256 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 RGS4P49798 205 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 OR4D1Q15615 310 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 PLEKHS1Q5SXH7 462 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 ANO7Q6IWH7 933 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 TRIM74Q86UV6 250 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 LINC00615Q96LM1 132 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 IER2Q9BTL4 223 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 ATXN10Q9UBB4 475 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 GPR34Q9UPC5 381 aa19.17■□□□□ 0.66
PDLIM2-205ENST00000397761 PRR23AA6NEV1 266 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 OR2AG2A6NM03 316 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 GPR89AB7ZAQ6 455 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CHUKO15111 745 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 NUAK1O60285 661 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 TRIM13O60858 407 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 KERAO60938 352 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 SNNO75324 88 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 GPC4O75487 556 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CDK14O94921 469 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 SEMA4FO95754 770 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 GSTM1P09488 218 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 GPR89BP0CG08 455 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 MTHFD2P13995 350 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 GRK2P25098 689 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 OXTRP30559 389 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 IGFALSP35858 605 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 ZXDAP98168 799 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 NFKB2Q00653 900 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 GSTM4Q03013 218 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 INPP5AQ14642 412 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CHI3L2Q15782 390 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 ACSBG2Q5FVE4 666 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 ATG16L1Q676U5 607 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CYHR1Q6ZMK1 362 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 STAG3L4Q8TBR4 150 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 KLK6Q92876 244 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CCDC126Q96EE4 140 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 HHIPQ96QV1 700 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CCT8L2Q96SF2 557 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CCM2Q9BSQ5 444 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 OR2AG1Q9H205 316 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CDYLQ9Y232 598 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 TECTAO75443 2155 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CDC7O00311 574 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 EDF1O60869 148 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 H2AFYO75367 372 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 SLCO2B1O94956 709 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 SERPINE1P05121 402 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms