RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 GRIK5Q16478 980 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 RNASE12Q5GAN4 147 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 INTS6LQ5JSJ4 861 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 EOGTQ5NDL2 527 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 VARS2Q5ST30 1063 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 NAIF1Q69YI7 327 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 THOC7Q6I9Y2 204 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 ABRAXAS1Q6UWZ7 409 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CHRDL2Q6WN34 429 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 STRADAQ7RTN6 431 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ZZZ3Q8IYH5 903 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 FSTL5Q8N475 847 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 EIF1ADQ8N9N8 165 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 C11orf65Q8NCR3 313 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 TRPV1Q8NER1 839 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ATXN2LQ8WWM7 1075 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 RASSF5Q8WWW0 418 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 IRF7Q92985 503 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 AZIN2Q96A70 460 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 MRPL45Q9BRJ2 306 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 RHOJQ9H4E5 214 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 B3GAT2Q9NPZ5 323 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 IFT46Q9NQC8 304 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 TRAF6Q9Y4K3 522 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 DHRS12A0PJE2 317 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ELOA3DA6NLF2 546 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 ADRB2P07550 413 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 OLR1P78380 273 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ELOA3BQ3SY89 546 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 TEX44Q53QW1 395 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 DCST1Q5T197 706 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ARHGAP40Q5TG30 622 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 FIP1L1Q6UN15 594 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 ISLR2Q6UXK2 745 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 FAM92BQ6ZTR7 304 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 SLC29A4Q7RTT9 530 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CEP97Q8IW35 865 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ELOA3Q8NG57 546 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 OR6N1Q8NGY5 312 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 RDH11Q8TC12 318 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 IPPKQ9H8X2 491 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 MRPS30Q9NP92 439 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 TDP1Q9NUW8 608 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 KLRF1Q9NZS2 232 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 C19orf25Q9UFG5 118 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 ASB3Q9Y575 518 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 LOC110117498-PIK3R3F6TDL0 507 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 TRIM38O00635 465 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 GNB5O14775 395 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ENTPD5O75356 428 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ZMPSTE24O75844 475 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 S100A6P06703 90 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 HOXB6P17509 224 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 GNAZP19086 355 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 DUSP3P51452 185 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 PNLIPRP1P54315 467 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 DLG4P78352 724 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 IFI35P80217 286 aaPredicted RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 TREML2Q5T2D2 321 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CXorf57Q6NSI4 855 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 SATL1Q86VE3 508 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 ECHDC2Q86YB7 292 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 DQX1Q8TE96 717 aaKnown RBP7.12□□□□□ -1.27
UPF2-203ENST00000397053 SH3RF2Q8TEC5 729 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 LRRN4Q8WUT4 740 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 WDR60Q8WVS4 1066 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 PIK3R3Q92569 461 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 MKL1Q969V6 931 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 CEP295NLQ96MC4 621 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 GPR21Q99679 349 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 KXD1Q9BQD3 176 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 OR2AG1Q9H205 316 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 OR51V1Q9H2C8 321 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 EGFL7Q9UHF1 273 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 COL1A2P08123 1366 aa7.12□□□□□ -1.27
UPF2-203ENST00000397053 A0A1W2PRU2 124 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 LCA5LO95447 670 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 METTL18O95568 372 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 IL33O95760 270 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 UROSP10746 265 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ZNF20P17024 532 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 CXCR1P25024 350 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 RHBDL3P58872 404 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PRKCZQ05513 592 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 FSTL1Q12841 308 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ZNF311Q5JNZ3 666 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 CCDC36Q8IYA8 594 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ZNF611Q8N823 705 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 OR6K6Q8NGW6 343 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 STYXQ8WUJ0 223 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 SEC61A2Q9H9S3 476 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 BRD7Q9NPI1 651 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ABCB8Q9NUT2 735 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ADGRE2Q9UHX3 823 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 FCF1Q9Y324 198 aaKnown RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 PCDHGA11Q9Y5H2 935 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 MBD5Q9P267 1494 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 TRIM64BA6NI03 449 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ANXA2P2A6NMY6 339 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms