RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ACTN3Q08043 901 aaPredicted RBP17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 KIAA0930Q6ICG6 404 aaPredicted RBP17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 PLPP6Q8IY26 295 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 GABPB2Q8TAK5 448 aaPredicted RBP17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 FAM174AQ8TBP5 190 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 C10orf82Q8WW14 230 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 CAAP1Q9H8G2 361 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 SNX15Q9NRS6 342 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 EMCNQ9ULC0 261 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 RIMKLBQ9ULI2 386 aa17.3■□□□□ 0.36
TNFSF13-205ENST00000396545 BRINP1O60477 761 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 TGDSO95455 350 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 IGSF6O95976 241 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 GSRP00390 522 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 CKMT1AP12532 417 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 ADRB3P13945 408 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 BGNP21810 368 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 CCNHP51946 323 aaPredicted RBP17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 RPL26P61254 145 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 SNRPD1P62314 119 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 DAB2P98082 770 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 FGL2Q14314 439 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 GRM3Q14832 879 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 GALNTL6Q49A17 601 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 KIAA1161Q6NSJ0 714 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 ESRP1Q6NXG1 681 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 Q6ZSR6 202 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 RMDN2Q96LZ7 410 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 TRIB3Q96RU7 358 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 GPR22Q99680 433 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 HEPHQ9BQS7 1158 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 TSSK1BQ9BXA7 367 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 TDRD1Q9BXT4 1180 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 RHOJQ9H4E5 214 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 RPL26L1Q9UNX3 145 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 SLC12A4Q9UP95 1085 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 FADS3Q9Y5Q0 445 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 HS3ST3A1Q9Y663 406 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 USH1CQ9Y6N9 552 aa17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 TDRD6O60522 2096 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-205ENST00000396545 PLIN3O60664 434 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 PRKCGP05129 697 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 MPOP05164 745 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 TYK2P29597 1187 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 RPS21P63220 83 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 ILF2Q12905 390 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 CARD16Q5EG05 197 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 SIRPB2Q5JXA9 342 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 PTAR1Q7Z6K3 402 aaPredicted RBP17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 ZC3HC1Q86WB0 502 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 GBP7Q8N8V2 638 aaPredicted RBP17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 VPS39Q96JC1 886 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 BMFQ96LC9 184 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 SLC17A9Q9BYT1 436 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 NLGN3Q9NZ94 848 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 MTO1Q9Y2Z2 717 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 FCF1Q9Y324 198 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 RAI2Q9Y5P3 530 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 ACTL7AQ9Y615 435 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 ATMQ13315 3056 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 LY6G6EA0A0G2JKS1 128 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 A0A1W2PQ67 120 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 POM121BA6NF01 834 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 AP1G1O43747 822 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 SOCS5O75159 536 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 MT-CO3P00414 261 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 PROCP04070 461 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 TROVE2P10155 538 aaKnown RBP eCLIP17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 RGRP47804 291 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 UGP2Q16851 508 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 TSTD2Q5T7W7 516 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 LRRC69Q6ZNQ3 347 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 PARS2Q7L3T8 475 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 CLEC14AQ86T13 490 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 DCP2Q8IU60 420 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 SLC25A41Q8N5S1 370 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 BRSK1Q8TDC3 778 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 FGF11Q92914 225 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 C7orf26Q96N11 449 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 TUBGCP5Q96RT8 1024 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 MECRQ9BV79 373 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 PRORYQ9H606 182 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 SLC2A6Q9UGQ3 507 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 U3KQA8 63 aa17.28■□□□□ 0.36
TNFSF13-205ENST00000396545 SCAMP1O15126 338 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 RAD51BO15315 384 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 RRP8O43159 456 aaKnown RBP17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 VAPBO95292 243 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 ALPPL2P10696 532 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 SCTRP47872 440 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 POLD2P49005 469 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 RAD51Q06609 339 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 FZD2Q14332 565 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 CNGA3Q16281 694 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 ZNF542PQ5EBM4 170 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 CDCP2Q5VXM1 449 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 ATG16L1Q676U5 607 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 CMC1Q7Z7K0 106 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 NUDCD3Q8IVD9 361 aa17.27■□□□□ 0.35
TNFSF13-205ENST00000396545 FAM181AQ8N9Y4 354 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms