RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 FUNDC1Q8IVP5 155 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 AMER2Q8N7J2 671 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 C2orf69Q8N8R5 385 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 ZNF680Q8NEM1 530 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 CLHC1Q8NHS4 586 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 FAM45AQ8TCE6 357 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 COQ8BQ96D53 544 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 COPS4Q9BT78 406 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 FTHL17Q9BXU8 183 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 FAM83DQ9H4H8 585 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 NARFQ9UHQ1 456 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 KCNH4Q9UQ05 1017 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 PCDHA1Q9Y5I3 950 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 CSADQ9Y600 493 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 STON1Q9Y6Q2 735 aa12.4□□□□□ -0.43
SLC28A1-203ENST00000394573 TRAV19A0A0A6YYK7 116 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 A0A1W2PQ09 198 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 H0YC42 278 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 UPK1AO00322 258 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ADAM11O75078 769 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ZNF623O75123 536 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 PMPCBO75439 489 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ACADMP11310 421 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 CPT1AP50416 773 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 CDH6P55285 790 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 RAPSNQ13702 412 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 NOMO1Q15155 1222 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 KDELC1Q6UW63 502 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 STRA8Q7Z7C7 330 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ZNF540Q8NDQ6 660 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 WDR48Q8TAF3 677 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ZNF578Q96N58 590 aaPredicted RBP12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 SDCBP2Q9H190 292 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 CDCP1Q9H5V8 836 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ASB7Q9H672 318 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 SPON1Q9HCB6 807 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 CYP4F12Q9HCS2 524 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 GPATCH2LQ9NWQ4 482 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 TMEM5Q9Y2B1 443 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 MTF2Q9Y483 593 aaPredicted RBP12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 USP54Q70EL1 1684 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 GLI3P10071 1580 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ZNF487B1APH4 448 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 TEX46H3BTG2 121 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 GPIP06744 558 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 SELLP14151 372 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ZNF37AP17032 561 aaPredicted RBP12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 CHRNA5P30532 468 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 HTR7P34969 479 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 GSK3BP49841 420 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 FCGRTP55899 365 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 OLR1P78380 273 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 BNC1Q01954 994 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 CDK5R2Q13319 367 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 TNK1Q13470 666 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 PICALMQ13492 652 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 SIM2Q14190 667 aaPredicted RBP12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 PIGHQ14442 188 aaPredicted RBP12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ZNF460Q14592 562 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 FAM26DQ5JW98 314 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 SH3PXD2AQ5TCZ1 1133 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 SPESP1Q6UW49 350 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ACCSQ96QU6 501 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 HSD17B14Q9BPX1 270 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 PCDHB16Q9NRJ7 776 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 EMC3Q9P0I2 261 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 VTI1BQ9UEU0 232 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 ZNF639Q9UID6 485 aa12.39□□□□□ -0.43
SLC28A1-203ENST00000394573 LOC100130705A0A1B0GUX0 176 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 TCRBV5S2A0A599 114 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 F8W036 122 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 OLFM2O95897 454 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 NPPAP01160 153 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 SBK3P0C264 359 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 ACVR2AP27037 513 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 MTHFRP42898 656 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 TUSC1Q2TAM9 212 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 SYT6Q5T7P8 510 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 C8orf82Q6P1X6 216 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 ABI3BPQ7Z7G0 1075 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 B3GNT8Q7Z7M8 397 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 NLGN4YQ8NFZ3 816 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 SGTBQ96EQ0 304 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 CELF6Q96J87 481 aaKnown RBP12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 CHCHD6Q9BRQ6 235 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 OR51E2Q9H255 320 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 VPS33BQ9H267 617 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 ACOT13Q9NPJ3 140 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 HPF1Q9NWY4 346 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 STOML2Q9UJZ1 356 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 UTS2RQ9UKP6 389 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 SLC39A10Q9ULF5 831 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 GMDSO60547 372 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 SLC6A2P23975 617 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 GDI2P50395 445 aaKnown RBP12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 RAB25P57735 213 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 KCNK10P57789 538 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 GABPAQ06546 454 aa12.38□□□□□ -0.43
SLC28A1-203ENST00000394573 DSG2Q14126 1118 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms