RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 PCDHGC4Q9Y5F7 938 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 ZFP37Q9Y6Q3 630 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 PIP5K1BO14986 540 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 SCN2BO60939 215 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 F9P00740 461 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 NR4A1P22736 598 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 TRAF3Q13114 568 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 C16orf72Q14CZ0 275 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 RFTN2Q52LD8 501 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 IRAK1BP1Q5VVH5 260 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 LINGO4Q6UY18 593 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 SDCCAG8Q86SQ7 713 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 APCDD1Q8J025 514 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 FOXJ1Q92949 421 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 PCDHGA8Q9Y5G5 932 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 MAGEB16A2A368 324 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 TRIM38O00635 465 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 NPC1O15118 1278 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 SSX4O60224 188 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 CTSOP43234 321 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 NR1H2P55055 460 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 RPS3AP61247 264 aaKnown RBP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 NAA20P61599 178 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 PLCL1Q15111 1095 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 PHKG1Q16816 387 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 RWDD4Q6NW29 188 aaKnown RBP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 VRK3Q8IV63 474 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 ST13P4Q8IZP2 240 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 ADGRG2Q8IZP9 1017 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 SFRP1Q8N474 314 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 RDH11Q8TC12 318 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 FUBP3Q96I24 572 aaKnown RBP eCLIP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 MUS81Q96NY9 551 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 HBEGFQ99075 208 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 SEMA3CQ99985 751 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 MRPL57Q9BQC6 102 aaKnown RBP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 MED10Q9BTT4 135 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 ILKAPQ9H0C8 392 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 EXD2Q9NVH0 621 aa7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 NLE1Q9NVX2 485 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-207ENST00000394105 NUMA1Q14980 2115 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 LSM1O15116 133 aaKnown RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 SEMG2Q02383 582 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 GNA12Q03113 381 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 GRSF1Q12849 480 aaKnown RBP eCLIP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 IFRD2Q12894 506 aaPredicted RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 NFATC3Q12968 1075 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 IRF3Q14653 427 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 USP10Q14694 798 aaKnown RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 DGKKQ5KSL6 1271 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 INTS11Q5TA45 600 aaKnown RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 MIB1Q86YT6 1006 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 CENPKQ9BS16 269 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 FAM96AQ9H5X1 160 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 CCL26Q9Y258 94 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 PRG3Q9Y2Y8 225 aaPredicted RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 KIAA0100Q14667 2235 aaKnown RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 FGF10O15520 208 aaPredicted RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 TIMM44O43615 452 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 ECI2O75521 394 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 TGM1P22735 817 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 POU4F1Q01851 419 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 COL9A2Q14055 689 aaPredicted RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 TSNQ15631 228 aaKnown RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 SUSD1Q6UWL2 747 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 IGFN1Q86VF2 1251 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 PTCD2Q8WV60 388 aaKnown RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 SDHCQ99643 169 aaPredicted RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 GPATCH2Q9NW75 528 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 RRN3Q9NYV6 651 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 TIMM22Q9Y584 194 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 SEMG1P04279 462 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 ALPLP05186 524 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 EFEMP1Q12805 493 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 LCN8Q6JVE9 175 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 BLOC1S3Q6QNY0 202 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 EME1Q96AY2 570 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 PYCR2Q96C36 320 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 BTN2A3PQ96KV6 586 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 ZYG11BQ9C0D3 744 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 PCDH12Q9NPG4 1184 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 IL17CQ9P0M4 197 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 ACOT9Q9Y305 439 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 TNPO2O14787 897 aaKnown RBP7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 SEMA7AO75326 666 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 RFC2P35250 354 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 MERTKQ12866 999 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 MBOAT1Q6ZNC8 495 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 DTWD1Q8N5C7 304 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 DNAAF3Q8N9W5 541 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 PIP4K2CQ8TBX8 421 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 GIPC2Q8TF65 315 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 CAAP1Q9H8G2 361 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 AKIP1Q9NQ31 210 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 ENTPD7Q9NQZ7 604 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 BFARQ9NZS9 450 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 DSEQ9UL01 958 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 SNX13Q9Y5W8 968 aa7.62□□□□□ -1.19
GAPVD1-207ENST00000394105 ARPC2O15144 300 aa7.61□□□□□ -1.19
GAPVD1-207ENST00000394105 GPR182O15218 404 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms