RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 DSC1Q08554 894 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 PPP1R8Q12972 351 aaKnown RBP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 C17orf99Q6UX52 265 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 LINGO4Q6UY18 593 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 DNAJC14Q6Y2X3 702 aaPredicted RBP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 FAM86B1Q8N7N1 296 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 PDZD8Q8NEN9 1154 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 FBXO30Q8TB52 745 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 ITFG1Q8TB96 612 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 TRIB2Q92519 343 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 FIG4Q92562 907 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 SGCDQ92629 289 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 GFM2Q969S9 779 aaKnown RBP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 CCDC97Q96F63 343 aaPredicted RBP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 PSKH2Q96QS6 385 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 TDRD1Q9BXT4 1180 aaKnown RBP13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 ING2Q9H160 280 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 RAI2Q9Y5P3 530 aa13.77□□□□□ -0.21
GAPVD1-205ENST00000394084 H0Y858 1186 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 SCAMP3O14828 347 aaKnown RBP13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 STX7O15400 261 aaKnown RBP13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 KLK8O60259 260 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 PAX3P23760 479 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 FKBP1BP68106 108 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 GRIK2Q13002 908 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 DUSP4Q13115 394 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 CCNYL2Q5T2Q4 361 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 CYP20A1Q6UW02 462 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 RSPO2Q6UXX9 243 aaPredicted RBP13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 DLEU7Q6UYE1 221 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 FRA10AC1Q70Z53 315 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 C16orf59Q7L2K0 433 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 PROSER1Q86XN7 944 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 NAT16Q8N8M0 369 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 SOCS4Q8WXH5 440 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 C17orf80Q9BSJ5 609 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 GPR62Q9BZJ7 368 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 ADNPQ9H2P0 1102 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 ACTL8Q9H568 366 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 FANCEQ9HB96 536 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 TLR9Q9NR96 1032 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 HCSTQ9UBK5 93 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 AGO1Q9UL18 857 aaKnown RBP13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 RIMKLBQ9ULI2 386 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 GMEB1Q9Y692 573 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 GUCA1CO95843 209 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 C7P10643 843 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 CYBAP13498 195 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 SGSHP51688 502 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 ARSFP54793 590 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 USP51Q70EK9 711 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 DENND1CQ8IV53 801 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 BPIFB1Q8TDL5 484 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 C1QTNF3Q9BXJ4 246 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 PFDN4Q9NQP4 134 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 PCDHGA11Q9Y5H2 935 aa13.76□□□□□ -0.21
GAPVD1-205ENST00000394084 DFNA5O60443 496 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 CDH1P12830 882 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 IL7RP16871 459 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 MATN1P21941 496 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 DCKP27707 260 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 GGT5P36269 586 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 LAPTM5Q13571 262 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 AP5B1Q2VPB7 878 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 SPATS1Q496A3 300 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 RFTN2Q52LD8 501 aaPredicted RBP13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 ANKRD34AQ69YU3 496 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 RIMKLAQ8IXN7 391 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 HS3ST5Q8IZT8 346 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 OR4F6Q8NGB9 312 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 ISG20Q96AZ6 181 aaKnown RBP13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 CGREF1Q99674 301 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 ARHGAP39Q9C0H5 1083 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 CARS2Q9HA77 564 aaKnown RBP13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 IL37Q9NZH6 218 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 PLXNA3P51805 1871 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 MTMR11A4FU01 709 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 FFAR3O14843 346 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 GPR42O15529 346 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 ACSL4O60488 711 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 ZNF182P17025 639 aaPredicted RBP13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 HMOX2P30519 316 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 MTHFRP42898 656 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 MAGEA11P43364 429 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 TTPAP49638 278 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 HLCSP50747 726 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 ILF2Q12905 390 aaKnown RBP13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 TRAF2Q12933 501 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 ABRAXAS2Q15018 415 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 ZNF382Q96SR6 550 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 TBCDQ9BTW9 1192 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 MAGEH1Q9H213 219 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 SMURF2Q9HAU4 748 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 MAGEL2Q9UJ55 1249 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 UTS2RQ9UKP6 389 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 PCDHB3Q9Y5E6 796 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 SH3PXD2BA1X283 911 aa13.75□□□□□ -0.21
GAPVD1-205ENST00000394084 FAM92AA1XBS5 289 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms