RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 DRG2P55039 364 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 WNT3AP56704 352 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 WASHC5Q12768 1159 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 ITGA9Q13797 1035 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 CARFQ8N187 725 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 RNF25Q96BH1 459 aaPredicted RBP17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 CCDC42Q96M95 316 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 FCRL5Q96RD9 977 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 GPR87Q9BY21 358 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 LHX9Q9NQ69 397 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 ANKMY1Q9P2S6 941 aa17.14■□□□□ 0.33
SNRPA1-202ENST00000394082 CBFA2T2O43439 604 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 HLA-DPA1P20036 260 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 CD97P48960 835 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 PMS2P54278 862 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 ACY1Q03154 408 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 SIRPB2Q5JXA9 342 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 ATP1A1-AS1Q5TC04 95 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 IRGCQ6NXR0 463 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 MFSD7Q6UXD7 560 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 BEND7Q8N7W2 519 aaPredicted RBP17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 GDAP1Q8TB36 358 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 BPIFA1Q9NP55 256 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 ABHD10Q9NUJ1 306 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 LNPEPQ9UIQ6 1025 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 RARRES3Q9UL19 164 aa17.13■□□□□ 0.33
SNRPA1-202ENST00000394082 DOPEY2Q9Y3R5 2298 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 GLYATL1P3A0A0U1RQE8 302 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 PSTPIP1O43586 416 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 RFPL1O75677 317 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 POP7O75817 140 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 FURINP09958 794 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 HADHBP55084 474 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 DYNLT1P63172 113 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 MPP3Q13368 585 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 DNASE1L3Q13609 305 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 ERV3-1Q14264 604 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 SLC1A5Q15758 541 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 RPE65Q16518 533 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 METRNLQ641Q3 311 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 FAM92BQ6ZTR7 304 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 RASGEF1AQ8N9B8 481 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 SIDT2Q8NBJ9 832 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 P3H4Q92791 437 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 MIB2Q96AX9 1013 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 MRGPRX2Q96LB1 330 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 CHP1Q99653 195 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 NHEJ1Q9H9Q4 299 aaPredicted RBP17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 UBP1Q9NZI7 540 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 TP53TG5Q9Y2B4 290 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 PKP3Q9Y446 797 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 NBASA2RRP1 2371 aa17.12■□□□□ 0.33
SNRPA1-202ENST00000394082 IGHV5-51A0A0C4DH38 117 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 TLCD2A6NGC4 264 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 CST8O60676 142 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 TPM1P09493 284 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 PYGMP11217 842 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 NFKB1P19838 968 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 TUBB3Q13509 450 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 CHRNA6Q15825 494 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 IGFBP7Q16270 282 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 LONRF2Q1L5Z9 754 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 TFDP3Q5H9I0 405 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 GPRC6AQ5T6X5 926 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 GLT6D1Q7Z4J2 308 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 D2HGDHQ8N465 521 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 OR8K5Q8NH50 307 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 THAP4Q8WY91 577 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 C19orf43Q9BQ61 176 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 SAE1Q9UBE0 346 aaPredicted RBP17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 TRHDEQ9UKU6 1024 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 ACSL5Q9ULC5 683 aa17.11■□□□□ 0.33
SNRPA1-202ENST00000394082 OR5K3A6NET4 321 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 HACD1B0YJ81 288 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 GAPDHSO14556 408 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 SPOPO43791 374 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 MFAP3LO75121 409 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 KATNA1O75449 491 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 NTRK1P04629 796 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 MTHFD1P11586 935 aaKnown RBP17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 FOLR1P15328 257 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 COMTP21964 271 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 CTSCP53634 463 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 HSD11B2P80365 405 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 SEMA5AQ13591 1074 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 PPP2R5EQ16537 467 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 FAM182AQ5T1J6 154 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 PWWP2BQ6NUJ5 590 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 TMEM220Q6QAJ8 160 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 SPOCD1Q6ZMY3 1216 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 ZNF517Q6ZMY9 492 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 PID1Q7Z2X4 250 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 ZNF567Q8N184 647 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 TEX19Q8NA77 164 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 GPR150Q8NGU9 434 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 CT55Q8WUE5 264 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 OXNAD1Q96HP4 312 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 ELMO2Q96JJ3 720 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 LINC00615Q96LM1 132 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 TWSG1Q9GZX9 223 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms