RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 OOSP2Q86WS3 158 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 KCTD15Q96SI1 283 aaPredicted RBP19.49■□□□□ 0.71
SHANK1-203ENST00000391813 GSDMCQ9BYG8 508 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 ACSS2Q9NR19 701 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 ENTPD4Q9Y227 616 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 TIMM22Q9Y584 194 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 TEX264Q9Y6I9 313 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 DNAJB1P25685 340 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 E2F2Q14209 437 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.49■□□□□ 0.71
SHANK1-203ENST00000391813 FEM1CQ96JP0 617 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 ZNF347Q96SE7 839 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 Q9Y3F1 56 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 HTRA2O43464 458 aaPredicted RBP19.49■□□□□ 0.71
SHANK1-203ENST00000391813 KHDRBS3O75525 346 aaKnown RBP19.49■□□□□ 0.71
SHANK1-203ENST00000391813 CYP7B1O75881 506 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 METTL18O95568 372 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 CYP11A1P05108 521 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 PKMP14618 531 aaKnown RBP19.49■□□□□ 0.71
SHANK1-203ENST00000391813 HSPA14Q0VDF9 509 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 NPTX1Q15818 432 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 PITRM1Q5JRX3 1037 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 NSMCE3Q96MG7 304 aa19.49■□□□□ 0.71
SHANK1-203ENST00000391813 FAM234BA2RU67 622 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 PIP5K1BO14986 540 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 HPGDP15428 266 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 WSCD1Q658N2 575 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 CCDC185Q8N715 623 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 PCDH19Q8TAB3 1148 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 USP7Q93009 1102 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 FAM84AQ96KN4 292 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 CIPCQ9C0C6 399 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 SLC28A3Q9HAS3 691 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 ZBTB26Q9HCK0 441 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 VPS51Q9UID3 782 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 RPP40O75818 363 aaKnown RBP19.48■□□□□ 0.71
SHANK1-203ENST00000391813 C7P10643 843 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 HTR7P34969 479 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 TAS2R39P59534 338 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 COLGALT2Q8IYK4 626 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 GPR65Q8IYL9 337 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 PHTF2Q8N3S3 785 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 PGLYRP2Q96PD5 576 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 TSSK3Q96PN8 268 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 FAIMQ9NVQ4 179 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 TAS2R7Q9NYW3 318 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 ARPC2O15144 300 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 RPN2P04844 631 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 TIGD6Q17RP2 521 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 TPRG1LQ5T0D9 272 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 KRT77Q7Z794 578 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 CPNE8Q86YQ8 564 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 RASAL3Q86YV0 1011 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 TRUB1Q8WWH5 349 aaKnown RBP19.48■□□□□ 0.71
SHANK1-203ENST00000391813 ANKDD1BA6NHY2 528 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 GABBR2O75899 941 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 PRKCHP24723 683 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 NUMBP49757 651 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 TRMT11Q7Z4G4 463 aaKnown RBP19.48■□□□□ 0.71
SHANK1-203ENST00000391813 TREML1Q86YW5 311 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 C11orf65Q8NCR3 313 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 CSGALNACT1Q8TDX6 532 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 SPG21Q9NZD8 308 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 DUOX1Q9NRD9 1551 aa19.48■□□□□ 0.71
SHANK1-203ENST00000391813 ECHS1P30084 290 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 RORCP51449 518 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 ALDH3A2P51648 485 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 POLR2LP62875 67 aaKnown RBP19.47■□□□□ 0.71
SHANK1-203ENST00000391813 TAPT1Q6NXT6 567 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 OR10A6Q8NH74 314 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 STON2Q8WXE9 905 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 OXCT2Q9BYC2 517 aaPredicted RBP19.47■□□□□ 0.71
SHANK1-203ENST00000391813 RNF38Q9H0F5 515 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 MCUBQ9NWR8 336 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 PHRF1Q9P1Y6 1649 aaKnown RBP19.47■□□□□ 0.71
SHANK1-203ENST00000391813 SNX4O95219 450 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 CST3P01034 146 aaPredicted RBP19.47■□□□□ 0.71
SHANK1-203ENST00000391813 IFNA7P01567 189 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 CXCR2P25025 360 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 PIK3R6Q5UE93 754 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 PEG10Q86TG7 708 aaKnown RBP19.47■□□□□ 0.71
SHANK1-203ENST00000391813 RBFAQ8N0V3 343 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.47■□□□□ 0.71
SHANK1-203ENST00000391813 QSOX1O00391 747 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 ALDH1A2O94788 518 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 NR2F1P10589 423 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 EPORP19235 508 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 SERPINA4P29622 427 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 TGFBIQ15582 683 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 MYLK3Q32MK0 819 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 ZNF404Q494X3 552 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 RFTN2Q52LD8 501 aaPredicted RBP19.47■□□□□ 0.71
SHANK1-203ENST00000391813 CPTPQ5TA50 214 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 ZNF517Q6ZMY9 492 aaPredicted RBP19.47■□□□□ 0.71
SHANK1-203ENST00000391813 HID1Q8IV36 788 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 GALNT12Q8IXK2 581 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 SLC7A5P2Q9GIP4 190 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 SPATA7Q9P0W8 599 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 C10orf71Q711Q0 1435 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 SH3BGRLO75368 114 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms