RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 UBE2V1Q13404 147 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 TUBB2AQ13885 445 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 ADAMTSL4-AS1Q5T5F5 129 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 BHLHB9Q6PI77 547 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 ISCA2Q86U28 154 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 CEP97Q8IW35 865 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 RNF168Q8IYW5 571 aaPredicted RBP2.99□□□□□ -1.93
TRAV40-201ENST00000390467 HJURPQ8NCD3 748 aaPredicted RBP2.99□□□□□ -1.93
TRAV40-201ENST00000390467 TRPC4APQ8TEL6 797 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 SEMA4DQ92854 862 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 POM121L2Q96KW2 1035 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 LINC00479Q96M42 142 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 TUBB2BQ9BVA1 445 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 TMEM39BQ9GZU3 492 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 WDR13Q9H1Z4 485 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 PREBQ9HCU5 417 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 BARHL2Q9NY43 387 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 LIMA1Q9UHB6 759 aaKnown RBP2.99□□□□□ -1.93
TRAV40-201ENST00000390467 TSPYL4Q9UJ04 414 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 KCNE2Q9Y6J6 123 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 PRSS21Q9Y6M0 314 aa2.99□□□□□ -1.93
TRAV40-201ENST00000390467 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 J3QR06 171 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 SMAD9O15198 467 aaKnown RBP2.98□□□□□ -1.93
TRAV40-201ENST00000390467 ARHGEF9O43307 516 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 NDUFS3O75489 264 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 DAB1O75553 588 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 ZFAND5O76080 213 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 AGR2O95994 175 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 CLEC3BP05452 202 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 ZNF10P21506 573 aaPredicted RBP2.98□□□□□ -1.93
TRAV40-201ENST00000390467 ITGA3P26006 1051 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 CCR9P51686 369 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 GPR143P51810 404 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 CASP6P55212 293 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 DSCR10P59022 87 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 GTDC1Q4AE62 458 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 ASPRV1Q53RT3 343 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 TMEM198Q66K66 360 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 CLEC17AQ6ZS10 378 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 STXBP4Q6ZWJ1 553 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 ZNF534Q76KX8 674 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 ARHGAP12Q8IWW6 846 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 DIS3L2Q8IYB7 885 aaKnown RBP2.98□□□□□ -1.93
TRAV40-201ENST00000390467 CRYBG2Q8N1P7 616 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 FRMD1Q8N878 549 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 GSDMBQ8TAX9 411 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 SETD4Q9NVD3 440 aa2.98□□□□□ -1.93
TRAV40-201ENST00000390467 A0A0J9YWU9 116 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 A0A1B0GVC2 190 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 MEIOCA2RUB1 952 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 TMEM8BA6NDV4 472 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 ZNF197O14709 1029 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 ZBTB43O43298 467 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 GPR137BO60478 399 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 TRMUO75648 421 aaKnown RBP2.97□□□□□ -1.93
TRAV40-201ENST00000390467 CSPG5O95196 566 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 FRMD6-AS1P0C7T7 363 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 CKMT2P17540 419 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 HOXC13P31276 330 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 WNT5AP41221 380 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 PIK3CAP42336 1068 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 GALCP54803 685 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 RPS3AP61247 264 aaKnown RBP2.97□□□□□ -1.93
TRAV40-201ENST00000390467 NIPAL4Q0D2K0 466 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 PRKAA1Q13131 559 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 MED22Q15528 200 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 NAB2Q15742 525 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 TSTQ16762 297 aaKnown RBP2.97□□□□□ -1.93
TRAV40-201ENST00000390467 PWWP2BQ6NUJ5 590 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 GLDNQ6ZMI3 551 aaPredicted RBP2.97□□□□□ -1.93
TRAV40-201ENST00000390467 GALNT13Q8IUC8 556 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 PLD3Q8IV08 490 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 SMAP1Q8IYB5 467 aaPredicted RBP2.97□□□□□ -1.93
TRAV40-201ENST00000390467 SCML4Q8N228 414 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 ETNPPLQ8TBG4 499 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 SGCDQ92629 289 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 ELMOD3Q96FG2 381 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 C1orf74Q96LT6 269 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 DCTN5Q9BTE1 182 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 TRIM15Q9C019 465 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 RRP7BPQ9NSQ0 103 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 ZDHHC18Q9NUE0 388 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 ATAD3AQ9NVI7 634 aa2.97□□□□□ -1.93
TRAV40-201ENST00000390467 KLHL8Q9P2G9 620 aaPredicted RBP2.97□□□□□ -1.93
TRAV40-201ENST00000390467 C15orf62A8K5M9 175 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 SH2B2O14492 632 aaPredicted RBP2.96□□□□□ -1.94
TRAV40-201ENST00000390467 OGG1O15527 345 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 SORBS2O94875 1100 aaKnown RBP2.96□□□□□ -1.94
TRAV40-201ENST00000390467 PLA2G4BP0C869 781 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 FAM157CP0CG43 387 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 DPEP1P16444 411 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 SP100P23497 879 aaPredicted RBP2.96□□□□□ -1.94
TRAV40-201ENST00000390467 MSH2P43246 934 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 ZRSR2Q15696 482 aaKnown RBP2.96□□□□□ -1.94
TRAV40-201ENST00000390467 MEP1AQ16819 746 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 ARHGEF16Q5VV41 709 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 DENND5BQ6ZUT9 1274 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 ZNF440Q8IYI8 595 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 OR2T6Q8NHC8 308 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms