RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 HS3ST5Q8IZT8 346 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 DEPDC4Q8N2C3 294 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 CNIH3Q8TBE1 160 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 ZFYVE19Q96K21 471 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 TRMOQ9BU70 441 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 KIFC1Q9BW19 673 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 CXCL16Q9H2A7 254 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 DUSP21Q9H596 190 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 USE1Q9NZ43 259 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 RCOR3Q9P2K3 495 aaPredicted RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 ANKRD12Q6UB98 2062 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 LACTBL1A8MY62 500 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 EFCAB9A8MZ26 197 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 ZBTB24O43167 697 aaPredicted RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 CNTN5O94779 1100 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 SEMA3DO95025 777 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 APOA1P02647 267 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 ITGB3P05106 788 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 LGALS2P05162 132 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 CYP2C18P33260 490 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 RYKP34925 604 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 ARHGAP1Q07960 439 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 TRAF3Q13114 568 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 PAGE3Q5JUK9 113 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 ZNF438Q7Z4V0 828 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 RNF135Q8IUD6 432 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 CNTN4Q8IWV2 1026 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 REXO5Q96IC2 774 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 MAP6Q96JE9 813 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 ASB2Q96Q27 587 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 VPS35Q96QK1 796 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 PLEKHA5Q9HAU0 1116 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 PTPRHQ9HD43 1115 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 UBA2Q9UBT2 640 aaPredicted RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 ABT1Q9ULW3 272 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 WBP11Q9Y2W2 641 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 DNAJC15Q9Y5T4 150 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 ERI2A8K979 691 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 A8MV72 311 aaPredicted RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 FAM25AB3EWG3 89 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 FAM25CB3EWG5 89 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 FAM25GB3EWG6 89 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 AP3D1O14617 1153 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 HBP1O60381 514 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 C22orf31O95567 290 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 CES1P23141 567 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 OR3A3P47888 321 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 TKTL1P51854 596 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 PRKCDQ05655 676 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 JADE1Q6IE81 842 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 GLRX5Q86SX6 157 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 CLYBLQ8N0X4 340 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 RNF170Q96K19 258 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 CYP2S1Q96SQ9 504 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 TTYH2Q9BSA4 534 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 REXO4Q9GZR2 422 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 FZD8Q9H461 694 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 RPF1Q9H9Y2 349 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 SLAMF8Q9P0V8 285 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 HTTP42858 3142 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 PCM1Q15154 2024 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 A0A0G2JMP0 313 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 B8ZZF3 427 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 POLR1CO15160 346 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 PRKD3O94806 890 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 TGFBR2P37173 567 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 DEFA1P59665 94 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 DEFA3P59666 94 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 RPS6KA2Q15349 733 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 PKDCCQ504Y2 493 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 FAM98BQ52LJ0 330 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 TPRG1LQ5T0D9 272 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 TWF2Q6IBS0 349 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 VN1R5Q7Z5H4 357 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 OSTM1Q86WC4 334 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 RASAL3Q86YV0 1011 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 C6orf62Q9GZU0 229 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 RPRD1BQ9NQG5 326 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 SETD4Q9NVD3 440 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 ERAP1Q9NZ08 941 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 DSEQ9UL01 958 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 KIAA1257Q9ULG3 409 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 BPTFQ12830 3046 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 EEF2KO00418 725 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 KATNA1O75449 491 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 MTRF1O75570 445 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 ANGPTL1O95841 491 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 STAG3L1P0CL83 205 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 ENPP1P22413 925 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 UGT2B10P36537 528 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 SLC35A2P78381 396 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 FCHO2Q0JRZ9 810 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 FSCN1Q16658 493 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 KIAA1841Q6NSI8 718 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 TAPT1Q6NXT6 567 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 SLC51BQ86UW2 128 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 CLEC4CQ8WTT0 213 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 TSPEARQ8WU66 669 aa14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 RBM4BQ9BQ04 359 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-201ENST00000389386 RBM4Q9BWF3 364 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms