RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ANKRD1Q15327 319 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 NFIL3Q16649 462 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 PNLIPRP3Q17RR3 467 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 COL28A1Q2UY09 1125 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 USP41Q3LFD5 358 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 EIPR1Q53HC9 387 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 ANKRD45Q5TZF3 282 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 TXNDC8Q6A555 127 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 XRRA1Q6P2D8 792 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 TMEM81Q6P7N7 255 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 PAPD4Q6PIY7 484 aaKnown RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 CORO6Q6QEF8 472 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 SLC22A25Q6T423 547 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 VITQ6UXI7 678 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 Q75L30 129 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 DPPA4Q7L190 304 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 RRM2BQ7LG56 351 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 CEACAM19Q7Z692 300 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 ZSCAN2Q7Z7L9 614 aaPredicted RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 RTN4RL2Q86UN3 420 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 MOGAT3Q86VF5 341 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 MARCH9Q86YJ5 346 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 C2CD5Q86YS7 1000 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 LACC1Q8IV20 430 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 FTSJ3Q8IY81 847 aaKnown RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 CACNA2D3Q8IZS8 1091 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 FAM177A1Q8N128 213 aaPredicted RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 CRYBG2Q8N1P7 616 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 GPD1LQ8N335 351 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 DCLK2Q8N568 766 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 NGEFQ8N5V2 710 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 EMC1Q8N766 993 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 C17orf47Q8NEP4 570 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 PRSS33Q8NF86 280 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 OR2T11Q8NH01 316 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 OR4C3Q8NH37 302 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 OR14L1PQ8NHC6 308 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 TYMSOSQ8TAI1 123 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF519Q8TB69 540 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 HM13Q8TCT9 377 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 ATP8B4Q8TF62 1192 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 HPSE2Q8WWQ2 592 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 SLCO2A1Q92959 643 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 TOMM40LQ969M1 308 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 RILPL2Q969X0 211 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 ELP4Q96EB1 424 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 ARSGQ96EG1 525 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 PDLIM5Q96HC4 596 aaKnown RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 KLHL15Q96M94 604 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 HARBI1Q96MB7 349 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 NSMCE3Q96MG7 304 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 COG8Q96MW5 612 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 GAL3ST4Q96RP7 486 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 ACOX2Q99424 681 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 ELAC2Q9BQ52 826 aaKnown RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 TMEM47Q9BQJ4 181 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 MGME1Q9BQP7 344 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 FUCA2Q9BTY2 467 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 CRB3Q9BUF7 120 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 GLIS2Q9BZE0 524 aaPredicted RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 WDR12Q9GZL7 423 aaKnown RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 SEMA6AQ9H2E6 1030 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 GNB4Q9HAV0 340 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 NYAP2Q9P242 653 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 GRHPRQ9UBQ7 328 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 HSPB7Q9UBY9 170 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 OR14J1Q9UGF5 321 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF107Q9UII5 783 aaPredicted RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 POMT2Q9UKY4 750 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 SLC7A7Q9UM01 511 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 A4GNTQ9UNA3 340 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 PPP1R3CQ9UQK1 317 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 VSIG4Q9Y279 399 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 AAR2Q9Y312 384 aaKnown RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 SLC6A5Q9Y345 797 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 LAS1LQ9Y4W2 734 aaKnown RBP0.44□□□□□ -2.34
SNORD28-201ENST00000384706 RIPK3Q9Y572 518 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 ANGPTL3Q9Y5C1 460 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 SCINQ9Y6U3 715 aa0.44□□□□□ -2.34
SNORD28-201ENST00000384706 UMODL1Q5DID0 1318 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 A0A087WUV0 522 aaPredicted RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 IGKV6-21A0A0C4DH24 114 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 TEX13CA0A0J9YWL9 993 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 TEX13DA0A0J9YY54 714 aaPredicted RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 FAM237AA0A1B0GTK4 181 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 MSGN1A6NI15 193 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 LRRC53A6NM62 1247 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 EIF4E1BA6NMX2 242 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SRRM4A7MD48 611 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 A8MXK9 166 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 USP17L23D6RBM5 183 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 H0Y9J4 135 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 KLF11O14901 512 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 HAT1O14929 419 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ATP6V0E1O15342 81 aa0.43□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF354AO60765 605 aaPredicted RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 KHDRBS3O75525 346 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 SEC31AO94979 1220 aaKnown RBP0.43□□□□□ -2.34
SNORD28-201ENST00000384706 IPO7O95373 1038 aaKnown RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms