RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 PTRH2Q9Y3E5 179 aaKnown RBP0.96□□□□□ -2.26
RNU6-42P-201ENST00000384165 TESMINQ9Y4I5 508 aa0.96□□□□□ -2.26
RNU6-42P-201ENST00000384165 MAGED1Q9Y5V3 778 aaPredicted RBP0.96□□□□□ -2.26
RNU6-42P-201ENST00000384165 ACTL7BQ9Y614 415 aa0.96□□□□□ -2.26
RNU6-42P-201ENST00000384165 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP0.96□□□□□ -2.26
RNU6-42P-201ENST00000384165 TRIP11Q15643 1979 aa0.96□□□□□ -2.26
RNU6-42P-201ENST00000384165 EXPH5Q8NEV8 1989 aa0.96□□□□□ -2.26
RNU6-42P-201ENST00000384165 DNAH17Q9UFH2 4485 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 A0A0A6YYC8 382 aaPredicted RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 LOC390937A0A1W2PQ73 354 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 A0A1W2PR80 420 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 C1orf226A1L170 272 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ARHGEF35A5YM69 484 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 SLC9B1P1A6NJY1 282 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 C16orf96A6NNT2 1141 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 AHRRA9YTQ3 701 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 VWC2LB2RUY7 222 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 C10orf142B7Z368 130 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 E7ENX8 843 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 I3L1I5 382 aaPredicted RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 SPINT1O43278 529 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZBTB43O43298 467 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 TRAF3IP2O43734 574 aaPredicted RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 IGSF3O75054 1194 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 WDR1O75083 606 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 CPNE3O75131 537 aaKnown RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 PRPF40AO75400 957 aaKnown RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ITGA10O75578 1167 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 RASSF9O75901 435 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 USP1O94782 785 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZNF432O94892 652 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 OAZ2O95190 189 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 CLIC3O95833 236 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 GPANK1O95872 356 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 FTCDO95954 541 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 PF4P02776 101 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 OATP04181 439 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 FGF1P05230 155 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 MSMBP08118 114 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 CELA3AP09093 270 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 HOXB7P09629 217 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 EGR2P11161 476 aaPredicted RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 GABRA1P14867 456 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ANPEPP15144 967 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ADRA2CP18825 462 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ATF6P18850 670 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ITIH2P19823 946 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ITGAXP20702 1163 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 BMP6P22004 513 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 IGFBP6P24592 240 aaPredicted RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 HTR1BP28222 390 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 AXLP30530 894 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 MCM5P33992 734 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 HSPA4P34932 840 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 HTR7P34969 479 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 OPRM1P35372 400 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ETV4P43268 484 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 MFAP3P55082 362 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 TIMM10P62072 90 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 SH3BP2P78314 561 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 TEKQ02763 1124 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 CHRNEQ04844 493 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 SMARCB1Q12824 385 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZP4Q12836 540 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 CDH17Q12864 832 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 CIRBPQ14011 172 aaKnown RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 MYBPC2Q14324 1141 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 SIX1Q15475 284 aaPredicted RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 MUM1Q2TAK8 710 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZNF284Q2VY69 593 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 P3H1Q32P28 736 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 C4orf46Q504U0 113 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 BEX5Q5H9J7 111 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 PLEKHS1Q5SXH7 462 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 C1orf185Q5T7R7 199 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 C1orf134Q5TEV5 83 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 FAM46CQ5VWP2 391 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 CDCA2Q69YH5 1023 aaPredicted RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 SPECC1LQ69YQ0 1117 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 SLC27A1Q6PCB7 646 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 TMED8Q6PL24 325 aaPredicted RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 KYAT3Q6YP21 454 aaKnown RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZNF620Q6ZNG0 422 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 GCNT7Q6ZNI0 430 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 LIAT1Q6ZQX7 453 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 HTR3DQ70Z44 454 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 CHST9Q7L1S5 443 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 TRIM46Q7Z4K8 759 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 HEATR3Q7Z4Q2 680 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 PATL1Q86TB9 770 aaKnown RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZNF410Q86VK4 478 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 SERPINA9Q86WD7 417 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 HORMAD1Q86X24 394 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 PLXDC1Q8IUK5 500 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 TMEM126BQ8IUX1 230 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 BBS7Q8IWZ6 715 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 LMNTD2Q8IXW0 634 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 KBTBD2Q8IY47 623 aa0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 MB21D2Q8IYB1 491 aaPredicted RBP0.95□□□□□ -2.26
RNU6-42P-201ENST00000384165 LYG1Q8N1E2 194 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms