RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 BUD23O43709 281 aaKnown RBP16.53■□□□□ 0.24
SMN2-201ENST00000380741 KIAA0754O94854 1291 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 NDUFA10O95299 355 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 PTMSP20962 102 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 DLSTP36957 453 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 HALP42357 657 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 MARCKSL1P49006 195 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 DMPKQ09013 629 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 IL11RAQ14626 422 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 SLC1A5Q15758 541 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 PPP2R5EQ16537 467 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 TFDP3Q5H9I0 405 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 LDLRAP1Q5SW96 308 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 ZDHHC20Q5W0Z9 365 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 FAM83HQ6ZRV2 1179 aaPredicted RBP16.53■□□□□ 0.24
SMN2-201ENST00000380741 AMZ2Q86W34 360 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 RASGRP3Q8IV61 690 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 CNGA4Q8IV77 575 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 DDHD1Q8NEL9 900 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 APOBEC4Q8WW27 367 aaKnown RBP16.53■□□□□ 0.24
SMN2-201ENST00000380741 KLHL6Q8WZ60 621 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 STAMBPL1Q96FJ0 436 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 QKIQ96PU8 341 aaKnown RBP eCLIP16.53■□□□□ 0.24
SMN2-201ENST00000380741 ZCCHC2Q9C0B9 1178 aaKnown RBP16.53■□□□□ 0.24
SMN2-201ENST00000380741 HACD3Q9P035 362 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 EPHA6Q9UF33 1036 aa16.53■□□□□ 0.24
SMN2-201ENST00000380741 NAV2Q8IVL1 2488 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 GLYATL1P3A0A0U1RQE8 302 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 OR2AG2A6NM03 316 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 GAPDHSO14556 408 aaPredicted RBP16.52■□□□□ 0.24
SMN2-201ENST00000380741 KCNJ13O60928 360 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 POP7O75817 140 aaKnown RBP16.52■□□□□ 0.24
SMN2-201ENST00000380741 FGF5P12034 268 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 HLA-DPA1P20036 260 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 HADHBP55084 474 aaKnown RBP16.52■□□□□ 0.24
SMN2-201ENST00000380741 MPP3Q13368 585 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 RPE65Q16518 533 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 GPRC6AQ5T6X5 926 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 PID1Q7Z2X4 250 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 KATNAL2Q8IYT4 538 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 COL26A1Q96A83 441 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 ABHD17AQ96GS6 310 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 VAT1Q99536 393 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 RAB33BQ9H082 229 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMN2-201ENST00000380741 LNPEPQ9UIQ6 1025 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 PSMD13Q9UNM6 376 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 PKP3Q9Y446 797 aa16.52■□□□□ 0.24
SMN2-201ENST00000380741 DOPEY2Q9Y3R5 2298 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 IGHV5-51A0A0C4DH38 117 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 GOLGA6L3A6NEY3 463 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 AKR1B15C9JRZ8 316 aaPredicted RBP16.51■□□□□ 0.23
SMN2-201ENST00000380741 SPAG6O75602 509 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 ZRANB2O95218 330 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMN2-201ENST00000380741 NELFEP18615 380 aaKnown RBP16.51■□□□□ 0.23
SMN2-201ENST00000380741 FECHP22830 423 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 TBX2Q13207 712 aaPredicted RBP16.51■□□□□ 0.23
SMN2-201ENST00000380741 ITGA9Q13797 1035 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 NFE2L1Q14494 772 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 PTPRCAPQ14761 206 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 TMEM220Q6QAJ8 160 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 PPP1R3BQ86XI6 285 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 CCDC50Q8IVM0 306 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 RSPH14Q9UHP6 348 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 KCTD3Q9Y597 815 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 PCDHB3Q9Y5E6 796 aa16.51■□□□□ 0.23
SMN2-201ENST00000380741 HACD1B0YJ81 288 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 TIAF1O95411 115 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 FURINP09958 794 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 PBLDP30039 288 aaPredicted RBP16.5■□□□□ 0.23
SMN2-201ENST00000380741 CASRP41180 1078 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 MAGEA1P43355 309 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 SEPT6Q14141 434 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 ERV3-1Q14264 604 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMN2-201ENST00000380741 RCOR2Q8IZ40 523 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 BEND7Q8N7W2 519 aaPredicted RBP16.5■□□□□ 0.23
SMN2-201ENST00000380741 FSD1LQ9BXM9 530 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 TSPY26PQ9H489 355 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 C10orf88Q9H8K7 445 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 SMOXQ9NWM0 555 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 SEMA5BQ9P283 1151 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 ANAPC2Q9UJX6 822 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 TRHDEQ9UKU6 1024 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 TFR2Q9UP52 801 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 KCNMB2Q9Y691 235 aa16.5■□□□□ 0.23
SMN2-201ENST00000380741 CFAP20Q9Y6A4 193 aaKnown RBP16.5■□□□□ 0.23
SMN2-201ENST00000380741 DNMT3AQ9Y6K1 912 aaPredicted RBP16.5■□□□□ 0.23
SMN2-201ENST00000380741 STX7O15400 261 aaKnown RBP16.49■□□□□ 0.23
SMN2-201ENST00000380741 KATNA1O75449 491 aa16.49■□□□□ 0.23
SMN2-201ENST00000380741 PRAMEF1O95521 474 aa16.49■□□□□ 0.23
SMN2-201ENST00000380741 AGTP01019 485 aa16.49■□□□□ 0.23
SMN2-201ENST00000380741 CCNYL3P0C7X3 344 aa16.49■□□□□ 0.23
SMN2-201ENST00000380741 AKT1P31749 480 aa16.49■□□□□ 0.23
SMN2-201ENST00000380741 TUBB3Q13509 450 aa16.49■□□□□ 0.23
SMN2-201ENST00000380741 KCNAB1Q14722 419 aa16.49■□□□□ 0.23
SMN2-201ENST00000380741 PLCL1Q15111 1095 aa16.49■□□□□ 0.23
SMN2-201ENST00000380741 LACTB2Q53H82 288 aaPredicted RBP16.49■□□□□ 0.23
SMN2-201ENST00000380741 FNBP1LQ5T0N5 605 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms