RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 OR6C65A6NJZ3 312 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 H0YAE9 185 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 KPNA5O15131 536 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 NUPL2O15504 423 aaKnown RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ASS1P00966 412 aaKnown RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF3P17036 446 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 DNAJB1P25685 340 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ACVR2AP27037 513 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 SOX11P35716 441 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ERVFC1P60507 584 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 SSTP61278 116 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 CYP4F2P78329 520 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF45Q02386 682 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 RGS1Q08116 209 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 CYP4F3Q08477 520 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF404Q494X3 552 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 LRRC8EQ6NSJ5 796 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 TAS1R3Q7RTX0 852 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 HDDC2Q7Z4H3 204 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 MRPL10Q7Z7H8 261 aaKnown RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 DPP9Q86TI2 863 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 P2RY8Q86VZ1 359 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 DHFR2Q86XF0 187 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 CBWD2Q8IUF1 395 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 P3H2Q8IVL5 708 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 LINC01465Q8N7H1 131 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF565Q8N9K5 539 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 KDM1BQ8NB78 822 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 BSNDQ8WZ55 320 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 DDX1Q92499 740 aaKnown RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 RPL3LQ92901 407 aaKnown RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 PHF21AQ96BD5 680 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 YIPF6Q96EC8 236 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 AHCYL2Q96HN2 611 aaKnown RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 RADILQ96JH8 1075 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 SLITRK1Q96PX8 696 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF416Q9BWM5 594 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 UPF3AQ9H1J1 476 aaKnown RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 MMP27Q9H306 513 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 SMOC2Q9H3U7 446 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 CD274Q9NZQ7 290 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 BTBD3Q9Y2F9 522 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 PCDHB12Q9Y5F1 795 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 PCDHGB6Q9Y5F9 930 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 METTL15A6NJ78 407 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 KCNU1A8MYU2 1149 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 GMDSO60547 372 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 MSCO60682 206 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 DDNO94850 711 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 C2P06681 752 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 UNGP13051 313 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 F8A1P23610 371 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 FASP25445 335 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 HOXA1P49639 335 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ERVK-8P63133 956 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ABRQ12979 859 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ZIK1Q3SY52 487 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 STXBP5Q5T5C0 1151 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 FCRLBQ6BAA4 426 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 C16orf62Q7Z3J2 963 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ENKURQ8TC29 256 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 YIPF5Q969M3 257 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 PCYT2Q99447 389 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 SDHCQ99643 169 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 SYT17Q9BSW7 474 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 C6orf62Q9GZU0 229 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-201ENST00000379989 ABHD16BQ9H3Z7 469 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 PTPRHQ9HD43 1115 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 GPRC5CQ9NQ84 441 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 TMEM181Q9P2C4 612 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 NAALAD2Q9Y3Q0 740 aa7.4□□□□□ -1.22
CDKL5-201ENST00000379989 RAB19A4D1S5 217 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 TAL1P17542 331 aaPredicted RBP7.4□□□□□ -1.23
CDKL5-201ENST00000379989 PRKCHP24723 683 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 CCR10P46092 362 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 RFX2P48378 723 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 PCDH1Q08174 1060 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 DSC1Q08554 894 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 CAPSQ13938 189 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 GPR68Q15743 365 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 C4orf46Q504U0 113 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 TPRG1LQ5T0D9 272 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 C10orf62Q5T681 223 aaPredicted RBP7.4□□□□□ -1.23
CDKL5-201ENST00000379989 PIK3R6Q5UE93 754 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 LRFN4Q6PJG9 635 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 TBPL2Q6SJ96 375 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 ZBTB33Q86T24 672 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 COMMD7Q86VX2 200 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 TCTE3Q8IZS6 198 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 CAMKK1Q8N5S9 505 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 YIPF7Q8N8F6 280 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 NIPA2Q8N8Q9 360 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 KCT2Q8NC54 265 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 OR8K5Q8NH50 307 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 SLC35B2Q8TB61 432 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 ASB12Q8WXK4 309 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 HDAC10Q969S8 669 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 NCLNQ969V3 563 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 SLC45A3Q96JT2 553 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 KREMEN1Q96MU8 473 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms