RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 OR8H3Q8N146 312 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 SRFBP1Q8NEF9 429 aaKnown RBP13.21□□□□□ -0.3
USP9X-202ENST00000378308 ATXN2LQ8WWM7 1075 aaKnown RBP13.21□□□□□ -0.3
USP9X-202ENST00000378308 TCEAL3Q969E4 200 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 PDCD2LQ9BRP1 358 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 MECRQ9BV79 373 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 ZNF350Q9GZX5 532 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 PLEKHA6Q9Y2H5 1048 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 HEBP2Q9Y5Z4 205 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 H0YGN5 161 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 SAP18O00422 153 aaKnown RBP13.21□□□□□ -0.3
USP9X-202ENST00000378308 MSX2P35548 267 aaPredicted RBP13.21□□□□□ -0.3
USP9X-202ENST00000378308 IST1P53990 364 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 BNIP2Q12982 314 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 USP4Q13107 963 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 SLCO6A1Q86UG4 719 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 FOXRED2Q8IWF2 684 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 CPT1CQ8TCG5 803 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 GTPBP3Q969Y2 492 aaKnown RBP13.21□□□□□ -0.3
USP9X-202ENST00000378308 DIRAS2Q96HU8 199 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 ZSWIM3Q96MP5 696 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 ZNF471Q9BX82 626 aaPredicted RBP13.21□□□□□ -0.3
USP9X-202ENST00000378308 TCF7L1Q9HCS4 588 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 MRPS30Q9NP92 439 aaKnown RBP13.21□□□□□ -0.3
USP9X-202ENST00000378308 BRD7Q9NPI1 651 aa13.21□□□□□ -0.3
USP9X-202ENST00000378308 CHD2O14647 1828 aaKnown RBP13.2□□□□□ -0.3
USP9X-202ENST00000378308 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 PSMG1O95456 288 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 TMEM125Q96AQ2 219 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 WDR12Q9GZL7 423 aaKnown RBP13.2□□□□□ -0.3
USP9X-202ENST00000378308 REREQ9P2R6 1566 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 ICE1Q9Y2F5 2266 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 AZIN1O14977 448 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 PDPK1O15530 556 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 CCR10P46092 362 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 CXCL9Q07325 125 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 LCN1P1Q5VSP4 162 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 SLC9A4Q6AI14 798 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 TSSK3Q96PN8 268 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 ERVW-1Q9UQF0 538 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 MEMO1Q9Y316 297 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 SPATA31A5Q5VU36 1347 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 SPATA31A7Q8IWB4 1347 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 CNTNAP1P78357 1384 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 BCKDKO14874 412 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 MAFKO60675 156 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 XIAPP98170 497 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 MXD1Q05195 221 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 PDK3Q15120 406 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 TNFAIP8L3Q5GJ75 292 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 HNRNPLLQ8WVV9 542 aaKnown RBP13.2□□□□□ -0.3
USP9X-202ENST00000378308 COPS5Q92905 334 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 CLPTM1LQ96KA5 538 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 RTFDC1Q9BY42 306 aaPredicted RBP13.2□□□□□ -0.3
USP9X-202ENST00000378308 TBL1XR1Q9BZK7 514 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 ZDHHC9Q9Y397 364 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 WFS1O76024 890 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 CLDN9O95484 217 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 IGFBP5P24593 272 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 MAP3K8P41279 467 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 DGKEP52429 567 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 GCNT1Q02742 428 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 ZFP69Q49AA0 526 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 GPR151Q8TDV0 419 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 CAVIN3Q969G5 261 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 PPM1MQ96MI6 270 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 SEC61A2Q9H9S3 476 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 KBTBD4Q9NVX7 518 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 PLA2R1Q13018 1463 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 A0A0J9YYE9 177 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 RPIAP49247 311 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 PRAMEF17Q5VTA0 474 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 AAGABQ6PD74 315 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 LINGO4Q6UY18 593 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 DGAT2Q96PD7 388 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 SNRNP25Q9BV90 132 aaKnown RBP13.2□□□□□ -0.3
USP9X-202ENST00000378308 DNAJC18Q9H819 358 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 POLR3BQ9NW08 1133 aaPredicted RBP13.2□□□□□ -0.3
USP9X-202ENST00000378308 FBXO9Q9UK97 447 aaPredicted RBP13.2□□□□□ -0.3
USP9X-202ENST00000378308 POU2F3Q9UKI9 436 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 A8MUA0 341 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 H3BSH0 61 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 TBX1O43435 398 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 C1QTNF8P60827 252 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 ILF3Q12906 894 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP9X-202ENST00000378308 SLC29A4Q7RTT9 530 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 AMIGO2Q86SJ2 522 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 MFSD3Q96ES6 412 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 ERVK-18Q9QC07 812 aa13.2□□□□□ -0.3
USP9X-202ENST00000378308 RSL24D1Q9UHA3 163 aaKnown RBP13.2□□□□□ -0.3
USP9X-202ENST00000378308 ZNF3P17036 446 aa13.19□□□□□ -0.3
USP9X-202ENST00000378308 OGNP20774 298 aaKnown RBP13.19□□□□□ -0.3
USP9X-202ENST00000378308 HSD17B2P37059 387 aa13.19□□□□□ -0.3
USP9X-202ENST00000378308 PRKCDQ05655 676 aa13.19□□□□□ -0.3
USP9X-202ENST00000378308 ZNF878C9JN71 531 aa13.19□□□□□ -0.3
USP9X-202ENST00000378308 PTX3P26022 381 aaPredicted RBP13.19□□□□□ -0.3
USP9X-202ENST00000378308 RGS19P49795 217 aa13.19□□□□□ -0.3
USP9X-202ENST00000378308 BLKP51451 505 aa13.19□□□□□ -0.3
USP9X-202ENST00000378308 CD47Q08722 323 aa13.19□□□□□ -0.3
USP9X-202ENST00000378308 ABHD13Q7L211 337 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms