RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 GPNMBQ14956 572 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 SBSNQ6UWP8 590 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 EFL1Q7Z2Z2 1120 aaKnown RBP10.79□□□□□ -0.68
BEST1-201ENST00000378043 RALGPS2Q86X27 583 aaPredicted RBP10.79□□□□□ -0.68
BEST1-201ENST00000378043 DPP10Q8N608 796 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 CYGBQ8WWM9 190 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 SEPT8Q92599 483 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 SEPHS2Q99611 448 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 TUBA8Q9NY65 449 aaPredicted RBP10.79□□□□□ -0.68
BEST1-201ENST00000378043 EBF1Q9UH73 591 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 VPS9D1Q9Y2B5 631 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 ANAPC1Q9H1A4 1944 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 A0A087WXM4 84 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 TYW5A2RUC4 315 aaKnown RBP10.79□□□□□ -0.68
BEST1-201ENST00000378043 ZNF840PA6NDX5 716 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 H0Y858 1186 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 TSPAN3O60637 253 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 SNAP29O95721 258 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 CAPN1P07384 714 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 UMPSP11172 480 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 G6PDP11413 515 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 FCGR1AP12314 374 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 PRKG2Q13237 762 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 ATP6AP1LQ52LC2 224 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 HABP4Q5JVS0 413 aaKnown RBP10.79□□□□□ -0.68
BEST1-201ENST00000378043 RNF219Q5W0B1 726 aaPredicted RBP10.79□□□□□ -0.68
BEST1-201ENST00000378043 C16orf59Q7L2K0 433 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 HID1Q8IV36 788 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 TBC1D21Q8IYX1 336 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 PPM1MQ96MI6 270 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 LRRC3Q9BY71 257 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 RNF38Q9H0F5 515 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 RETREG1Q9H6L5 497 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 NTN4Q9HB63 628 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 TLR9Q9NR96 1032 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 HEBP1Q9NRV9 189 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 SMPD3Q9NY59 655 aaPredicted RBP10.79□□□□□ -0.68
BEST1-201ENST00000378043 TSR3Q9UJK0 312 aaKnown RBP10.79□□□□□ -0.68
BEST1-201ENST00000378043 FADS3Q9Y5Q0 445 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 UPK1AO00322 258 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 LSM1O15116 133 aaKnown RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 CLOCKO15516 846 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 ESR1P03372 595 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 CORO1AP31146 461 aaKnown RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 PTGER3P43115 390 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 RPS9P46781 194 aaKnown RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 ZNF177Q13360 481 aaPredicted RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 RFTN2Q52LD8 501 aaPredicted RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 USP51Q70EK9 711 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 RIMKLAQ8IXN7 391 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 ABI1Q8IZP0 508 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 DTWD1Q8N5C7 304 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 METTL6Q8TCB7 284 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 MAGEE2Q8TD90 523 aaPredicted RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 BPIFB1Q8TDL5 484 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 CHID1Q9BWS9 393 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 ADGRE3Q9BY15 652 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 SEZ6LQ9BYH1 1024 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 NACA2Q9H009 215 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 CD320Q9NPF0 282 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 RIC8BQ9NVN3 520 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 IL17CQ9P0M4 197 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 SUN2Q9UH99 717 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 CDC14AQ9UNH5 594 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 A0A1B0GVM2 712 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 E5RI56 91 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 GIPC1O14908 333 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 NPPAP01160 153 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 RPL17P18621 184 aaKnown RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 CAPGP40121 348 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 DGKQP52824 942 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 MTPNP58546 118 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 SMARCB1Q12824 385 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 ZBED5Q49AG3 693 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 NCEH1Q6PIU2 408 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 IL27RAQ6UWB1 636 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 TAS2R42Q7RTR8 314 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 GOLGA7Q7Z5G4 137 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 PATL1Q86TB9 770 aaKnown RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 TNIP2Q8NFZ5 429 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 OR4F6Q8NGB9 312 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 ISOC1Q96CN7 298 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 NPLQ9BXD5 320 aaPredicted RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 CWH43Q9H720 699 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 PREBQ9HCU5 417 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 RNF186Q9NXI6 227 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 LHX3Q9UBR4 397 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 DHRS7Q9Y394 339 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 CCL27Q9Y4X3 112 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 TMX2-CTNND1H3BSU7 103 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 FZD6O60353 706 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 NBNO60934 754 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 LDLRP01130 860 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 GALTP07902 379 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 CNPP09543 421 aaKnown RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 HMGA1P17096 107 aaKnown RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 ADARB1P78563 741 aaKnown RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 ABRAXAS2Q15018 415 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 KIAA0040Q15053 153 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms