RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 IL12RB2Q99665 862 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 PBX4Q9BYU1 374 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 PPCSQ9HAB8 311 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 TNFRSF12AQ9NP84 129 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 NDUFAF1Q9Y375 327 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 PRSS21Q9Y6M0 314 aa8.01□□□□□ -1.13
CKAP2-203ENST00000378037 A0A1W2PP55 124 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 PDLIM1O00151 329 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 RAD51BO15315 384 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 ULK1O75385 1050 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 TULP3O75386 442 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 ERAL1O75616 437 aaKnown RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 ATP5HO75947 161 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 ARHGEF15O94989 841 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 S1PR4O95977 384 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 ZNF8P17098 575 aaPredicted RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 ARNTP27540 789 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 PEX2P28328 305 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 ETV4P43268 484 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 CNTN1Q12860 1018 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 PPIGQ13427 754 aaKnown RBP eCLIP8□□□□□ -1.13
CKAP2-203ENST00000378037 MADCAM1Q13477 382 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 DENND5AQ6IQ26 1287 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 ANO7Q6IWH7 933 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 FBXO46Q6PJ61 603 aaPredicted RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 C6orf89Q6UWU4 347 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 GPRIN3Q6ZVF9 776 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 UTS2BQ765I0 119 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 RGL4Q8IZJ4 473 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 IRF7Q92985 503 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 PPP2R3CQ969Q6 453 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 FAM162AQ96A26 154 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 GPR22Q99680 433 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 RPP25Q9BUL9 199 aaKnown RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 TDRD1Q9BXT4 1180 aaKnown RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 FAM126AQ9BYI3 521 aaPredicted RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 DPY30Q9C005 99 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 ROGDIQ9GZN7 287 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 YY1AP1Q9H869 796 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 AKTIPQ9H8T0 292 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 OXSMQ9NWU1 459 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 ANGPTL2Q9UKU9 493 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 DOLKQ9UPQ8 538 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 ASB1Q9Y576 335 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 TRPC5OSA6NMA1 111 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 AP3B1O00203 1094 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 TGFB1P01137 390 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 APOA4P06727 396 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 CYP4B1P13584 511 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 PLA2G16P53816 162 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 SLC18A2Q05940 514 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 SPDYE7PQ495Y7 208 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 DNAL1Q4LDG9 190 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 AARS2Q5JTZ9 985 aaKnown RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 SPDYCQ5MJ68 293 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 KIAA0930Q6ICG6 404 aaPredicted RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 ERAP2Q6P179 960 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 C22orf39Q6P5X5 142 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 SLC30A9Q6PML9 568 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 RIN3Q8TB24 985 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 LKAAEAR1Q8TD35 194 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 UCMAQ8WVF2 138 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 RAD9AQ99638 391 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 KIFC1Q9BW19 673 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 C5AR2Q9P296 337 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 LIMD1Q9UGP4 676 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 ZNF490Q9ULM2 529 aaPredicted RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 RNF11Q9Y3C5 154 aa8□□□□□ -1.13
CKAP2-203ENST00000378037 COPG1Q9Y678 874 aaKnown RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 TDRD6O60522 2096 aaKnown RBP8□□□□□ -1.13
CKAP2-203ENST00000378037 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.99□□□□□ -1.13
CKAP2-203ENST00000378037 ILVBLA1L0T0 632 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 CCDC154A6NI56 674 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 ZSCAN9O15535 394 aaPredicted RBP7.99□□□□□ -1.13
CKAP2-203ENST00000378037 SERPINI2O75830 405 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 CYP7B1O75881 506 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 OR56A5P0C7T3 313 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 ACADMP11310 421 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 STC1P52823 247 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 AIF1P55008 147 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 PSME3P61289 254 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 C1orf61Q13536 156 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 MFSD4BQ5TF39 518 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 FAM129CQ86XR2 697 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 RAVER1Q8IY67 606 aaKnown RBP7.99□□□□□ -1.13
CKAP2-203ENST00000378037 GPR26Q8NDV2 337 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 OR6Y1Q8NGX8 325 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 OR5AK3PQ8NH89 298 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 NT5C3BQ969T7 300 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 C3orf30Q96M34 536 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 CDK5RAP1Q96SZ6 601 aaKnown RBP7.99□□□□□ -1.13
CKAP2-203ENST00000378037 AARSD1Q9BTE6 412 aaKnown RBP7.99□□□□□ -1.13
CKAP2-203ENST00000378037 MCOLN1Q9GZU1 580 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 CWH43Q9H720 699 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 WARS2Q9UGM6 360 aaKnown RBP7.99□□□□□ -1.13
CKAP2-203ENST00000378037 TSPAN6O43657 245 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 PSMG1O95456 288 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 B3GALT4O96024 378 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 T-ENOLP0DO92 83 aa7.99□□□□□ -1.13
CKAP2-203ENST00000378037 ZNF37AP17032 561 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms