RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 DNAJC3Q13217 504 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 THOC5Q13769 683 aaKnown RBP13.02□□□□□ -0.32
CKAP2-202ENST00000378034 HLTFQ14527 1009 aaKnown RBP eCLIP13.02□□□□□ -0.32
CKAP2-202ENST00000378034 SEMA3AQ14563 771 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 CRYMQ14894 314 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 TYSND1Q2T9J0 566 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 PLA2G4EQ3MJ16 856 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 NEPROQ6NW34 567 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 CCM2Q9BSQ5 444 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 CARD6Q9BX69 1037 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 FAM114A2Q9NRY5 505 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 SIRPGQ9P1W8 387 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 MARCH4Q9P2E8 410 aaPredicted RBP13.02□□□□□ -0.32
CKAP2-202ENST00000378034 TBC1D29Q9UFV1 150 aa13.02□□□□□ -0.32
CKAP2-202ENST00000378034 ZC3H7BQ9UGR2 993 aaKnown RBP13.02□□□□□ -0.32
CKAP2-202ENST00000378034 DNAH14Q0VDD8 3507 aa13.02□□□□□ -0.33
CKAP2-202ENST00000378034 ARHGEF17Q96PE2 2063 aaPredicted RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 KIR2DS5A0A0G2JLQ3 304 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 A0A0G2JNG1 304 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 A6NCN8 305 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 BHMG1C9JSJ3 638 aaPredicted RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 KIR2DS3K7RE56 304 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 NDUFS3O75489 264 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 RFPL3O75679 317 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 FTH1P02794 183 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 PNLIPP16233 465 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 GLB1P16278 677 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 PLTPP55058 493 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 E2F1Q01094 437 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 SLC7A5Q01650 507 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 PDIA2Q13087 525 aaKnown RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 FRG1Q14331 258 aaKnown RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 KIR2DS5Q14953 304 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 DNTTIP2Q5QJE6 756 aaKnown RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 IYDQ6PHW0 289 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 ABRAXAS1Q6UWZ7 409 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 ERMP1Q7Z2K6 904 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 NAGSQ8N159 534 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 OTUD6BQ8N6M0 293 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 BEND7Q8N7W2 519 aaPredicted RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 HM13Q8TCT9 377 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 PWWP2AQ96N64 755 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 TRIM56Q9BRZ2 755 aaKnown RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 TSSK1BQ9BXA7 367 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 OSGEPL1Q9H4B0 414 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 C20orf96Q9NUD7 363 aaPredicted RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 ACSL5Q9ULC5 683 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 DNAJC16Q9Y2G8 782 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 PRMT5O14744 637 aaPredicted RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 NUDT21O43809 227 aaKnown RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 RPS3P23396 243 aaKnown RBP eCLIP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 ADARP55265 1226 aaKnown RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 GUCY2DQ02846 1103 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 METRNLQ641Q3 311 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 STEAP4Q687X5 459 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 MICALCLQ6ZW33 695 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 SLCO6A1Q86UG4 719 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 CILP2Q8IUL8 1156 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 IGDCC3Q8IVU1 814 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 SFRP1Q8N474 314 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 CLDN19Q8N6F1 224 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 IFI44Q8TCB0 444 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 MAPK15Q8TD08 544 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 CCDC97Q96F63 343 aaPredicted RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 FAM167BQ9BTA0 163 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 INTS10Q9NVR2 710 aaKnown RBP13.01□□□□□ -0.33
CKAP2-202ENST00000378034 CHMP2BQ9UQN3 213 aa13.01□□□□□ -0.33
CKAP2-202ENST00000378034 CPED1A4D0V7 1026 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 ZW10O43264 779 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 OR1I1O60431 355 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 SNX2O60749 519 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 BANF1O75531 89 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 KCNA4P22459 653 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 FASLGP48023 281 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 GUSBP11Q6P575 273 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 ZNF449Q6P9G9 518 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 ZDHHC24Q6UX98 284 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 CEP128Q6ZU80 1094 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 EFL1Q7Z2Z2 1120 aaKnown RBP13□□□□□ -0.33
CKAP2-202ENST00000378034 KCNMB4Q86W47 210 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 ARL14Q8N4G2 192 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 FBXO36Q8NEA4 188 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 WDR48Q8TAF3 677 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 FBXO25Q8TCJ0 367 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 ADAMTS14Q8WXS8 1223 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 STN1Q9H668 368 aaKnown RBP13□□□□□ -0.33
CKAP2-202ENST00000378034 GNPTGQ9UJJ9 305 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 PRSS21Q9Y6M0 314 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 PDZK1P1A8MUH7 402 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 GOLGA8KD6RF30 607 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 GOLGA8TH3BQL2 631 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 XRCC1P18887 633 aaPredicted RBP13□□□□□ -0.33
CKAP2-202ENST00000378034 HALP42357 657 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 PLOD1Q02809 727 aaPredicted RBP13□□□□□ -0.33
CKAP2-202ENST00000378034 RPA4Q13156 261 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 N4BP2L1Q5TBK1 243 aaPredicted RBP13□□□□□ -0.33
CKAP2-202ENST00000378034 ZNF470Q6ECI4 717 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 UNC5AQ6ZN44 842 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 ZNF438Q7Z4V0 828 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 LDB1Q86U70 411 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms