RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 UBA6A0AVT1 1052 aaPredicted RBP15.69■□□□□ 0.1
CKAP4-201ENST00000378026 PFKLP17858 780 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 MZF1P28698 734 aaPredicted RBP15.69■□□□□ 0.1
CKAP4-201ENST00000378026 CCR1P32246 355 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 GGT5P36269 586 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 SERPINH1P50454 418 aaKnown RBP15.69■□□□□ 0.1
CKAP4-201ENST00000378026 PPP5CP53041 499 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 NDUFA5Q16718 116 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 SYT16Q17RD7 645 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 STEAP3Q658P3 488 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 ZNF549Q6P9A3 640 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 TAC4Q86UU9 113 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 CDYL2Q8N8U2 506 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 RHOXF1Q8NHV9 184 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 PROKR1Q8TCW9 393 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 NCLNQ969V3 563 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 LGALS12Q96DT0 336 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 SLC47A1Q96FL8 570 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 PRKD2Q9BZL6 878 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 RIBC2Q9H4K1 309 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 GALPQ9UBC7 116 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 UBQLN1Q9UMX0 589 aaKnown RBP15.69■□□□□ 0.1
CKAP4-201ENST00000378026 ILVBLA1L0T0 632 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 PIRO00625 290 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 BCKDKO14874 412 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 TULP3O75386 442 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 USP2O75604 605 aaPredicted RBP15.69■□□□□ 0.1
CKAP4-201ENST00000378026 PRKD3O94806 890 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 MFN2O95140 757 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 SLC26A2P50443 739 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 GABARAPL2P60520 117 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 VAC14Q08AM6 782 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 LCP2Q13094 533 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 DLK2Q6UY11 383 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 MICALL2Q8IY33 904 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 FAM162AQ96A26 154 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 ZHX1-C8orf76Q96EF9 292 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 OSMRQ99650 979 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 RNF38Q9H0F5 515 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 ACTR8Q9H981 624 aa15.69■□□□□ 0.1
CKAP4-201ENST00000378026 MRM3Q9HC36 420 aaKnown RBP15.69■□□□□ 0.1
CKAP4-201ENST00000378026 THG1LQ9NWX6 298 aaKnown RBP15.69■□□□□ 0.1
CKAP4-201ENST00000378026 MATN3O15232 486 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 CACNG3O60359 315 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 DFNA5O60443 496 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 PPP2R2BQ00005 443 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 CLCA4Q14CN2 919 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 COQ5Q5HYK3 327 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 ZNF484Q5JVG2 852 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 SYVN1Q86TM6 617 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 ATL1Q8WXF7 558 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 TSGA13Q96PP4 275 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 SMOQ99835 787 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 MYOCQ99972 504 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 DNAJB9Q9UBS3 223 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 DNAH12Q6ZR08 3092 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 MYBPHLA2RUH7 354 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 AGRPO00253 132 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 MT-ND2P03891 347 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 ALOX12P18054 663 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 EIF2DP41214 584 aaKnown RBP15.68■□□□□ 0.1
CKAP4-201ENST00000378026 PRKG2Q13237 762 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 TSNQ15631 228 aaKnown RBP15.68■□□□□ 0.1
CKAP4-201ENST00000378026 TMC5Q6UXY8 1006 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 RIOX2Q8IUF8 465 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 MICU2Q8IYU8 434 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 ATP6V0D2Q8N8Y2 350 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 ZNF540Q8NDQ6 660 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 RBM4BQ9BQ04 359 aaKnown RBP15.68■□□□□ 0.1
CKAP4-201ENST00000378026 RBM4Q9BWF3 364 aaKnown RBP15.68■□□□□ 0.1
CKAP4-201ENST00000378026 SLIRPQ9GZT3 109 aaKnown RBP15.68■□□□□ 0.1
CKAP4-201ENST00000378026 ZBTB20Q9HC78 741 aaPredicted RBP15.68■□□□□ 0.1
CKAP4-201ENST00000378026 MAGEE1Q9HCI5 957 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 DDX28Q9NUL7 540 aaKnown RBP15.68■□□□□ 0.1
CKAP4-201ENST00000378026 C3orf18Q9UK00 162 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 IKZF3Q9UKT9 509 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 PCDHGA10Q9Y5H3 936 aa15.68■□□□□ 0.1
CKAP4-201ENST00000378026 ASB14A6NK59 587 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 UPK1BO75841 260 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 CCNKO75909 580 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 PRSS23O95084 383 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 DBTP11182 482 aaKnown RBP15.67■□□□□ 0.1
CKAP4-201ENST00000378026 CD6P30203 668 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 CLK1P49759 484 aaKnown RBP15.67■□□□□ 0.1
CKAP4-201ENST00000378026 LILRA4P59901 499 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 CAMK2BQ13554 666 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 ANKS6Q68DC2 871 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 SLC27A1Q6PCB7 646 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 DET1Q7L5Y6 550 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 SPATA19Q7Z5L4 167 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 OR2T12Q8NG77 320 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 TRIB2Q92519 343 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 BTBD2Q9BX70 525 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 PARVBQ9HBI1 364 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 RASSF1Q9NS23 344 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 TBC1D14Q9P2M4 693 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.67■□□□□ 0.1
CKAP4-201ENST00000378026 TYW5A2RUC4 315 aaKnown RBP15.67■□□□□ 0.1
CKAP4-201ENST00000378026 LCKP06239 509 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 MASP1P48740 699 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms