RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 LINGO4Q6UY18 593 aa13□□□□□ -0.33
CUL4A-203ENST00000375441 EEF1AKMT1Q8WVE0 214 aa13□□□□□ -0.33
CUL4A-203ENST00000375441 ITFG2Q969R8 447 aa13□□□□□ -0.33
CUL4A-203ENST00000375441 TSSK3Q96PN8 268 aa13□□□□□ -0.33
CUL4A-203ENST00000375441 RBM4BQ9BQ04 359 aaKnown RBP13□□□□□ -0.33
CUL4A-203ENST00000375441 RBM4Q9BWF3 364 aaKnown RBP13□□□□□ -0.33
CUL4A-203ENST00000375441 YTHDF1Q9BYJ9 559 aaKnown RBP13□□□□□ -0.33
CUL4A-203ENST00000375441 ARMC7Q9H6L4 198 aa13□□□□□ -0.33
CUL4A-203ENST00000375441 SMURF2Q9HAU4 748 aa13□□□□□ -0.33
CUL4A-203ENST00000375441 ARL15Q9NXU5 204 aa13□□□□□ -0.33
CUL4A-203ENST00000375441 COL4A5P29400 1685 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 LCHNA4D1U4 455 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 SH3BGRLO75368 114 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ALDH2P05091 517 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 G6PDP11413 515 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 DGKAP23743 735 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ARSFP54793 590 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 APOFQ13790 326 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 GRB14Q14449 540 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 PIK3R6Q5UE93 754 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 RNF219Q5W0B1 726 aaPredicted RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 KDELC1Q6UW63 502 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ZC3H7AQ8IWR0 971 aaKnown RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 KIAA2013Q8IYS2 634 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 TMEM199Q8N511 208 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ROGDIQ9GZN7 287 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 EXOSC4Q9NPD3 245 aaKnown RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 EXD2Q9NVH0 621 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 GNPDA1P46926 289 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 KCNC1P48547 511 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 OR4D2P58180 307 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 CBLBQ13191 982 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 C6orf136Q5SQH8 315 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ARMC12Q5T9G4 340 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 SYVN1Q86TM6 617 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ADGRG5Q8IZF4 528 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 UMODL1-AS1Q8N2C9 162 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 SVOPQ8N4V2 548 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 OR6K2Q8NGY2 324 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ZNF420Q8TAQ5 688 aaPredicted RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 SLC13A3Q8WWT9 602 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 C6orf62Q9GZU0 229 aaPredicted RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 TNFRSF12AQ9NP84 129 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 SDR39U1Q9NRG7 319 aaPredicted RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 TRPM5Q9NZQ8 1165 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ZIM2Q9NZV7 527 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 GJD2Q9UKL4 321 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ZNF490Q9ULM2 529 aaPredicted RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 MBLAC1A4D2B0 266 aaPredicted RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 UBFD1O14562 309 aaKnown RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 INSIG1O15503 277 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 HSMCR30P0CW71 290 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 DUSP4Q13115 394 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 GTF2H2Q13888 395 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ATP6AP1Q15904 470 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 RAB41Q5JT25 222 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 PAGE3Q5JUK9 113 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 GTF2H2CQ6P1K8 395 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 MAMDC4Q6UXC1 1216 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 ARL10Q8N8L6 244 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 OR13J1Q8NGT2 312 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 DERL2Q9GZP9 239 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 EPS8L2Q9H6S3 715 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 DDX28Q9NUL7 540 aaKnown RBP12.99□□□□□ -0.33
CUL4A-203ENST00000375441 IMPAD1Q9NX62 359 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 PSME2Q9UL46 239 aa12.99□□□□□ -0.33
CUL4A-203ENST00000375441 RBM47A0AV96 593 aaKnown RBP12.98□□□□□ -0.33
CUL4A-203ENST00000375441 IQCF5A8MTL0 148 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 CLDN25C9JDP6 229 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 SEC24AO95486 1093 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 ANGPTL1O95841 491 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 FDXRP22570 491 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 MAPK1P28482 360 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 ALDH3A2P51648 485 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 HMBOX1Q6NT76 420 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 ZNF773Q6PK81 442 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 ANKRD46Q86W74 232 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 FUNDC1Q8IVP5 155 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 VPS37AQ8NEZ2 397 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 TMEM30AQ9NV96 361 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 DNMT3LQ9UJW3 386 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 SLC28A1O00337 649 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 BCKDKO14874 412 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 PRKD3O94806 890 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 HMGCS1Q01581 520 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 MOGQ16653 247 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 MEP1AQ16819 746 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 R3HCC1LQ7Z5L2 792 aaKnown RBP12.98□□□□□ -0.33
CUL4A-203ENST00000375441 CCDC103Q8IW40 242 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 FAM9CQ8IZT9 166 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 RHEBL1Q8TAI7 183 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 SPPL2AQ8TCT8 520 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 IGSF8Q969P0 613 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 TOR3AQ9H497 397 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 LRTM1Q9HBL6 345 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 AGPAT4Q9NRZ5 378 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 AIG1Q9NVV5 245 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 DNAJB9Q9UBS3 223 aa12.98□□□□□ -0.33
CUL4A-203ENST00000375441 SCN1AP35498 2009 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms