RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CDK14O94921 469 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 CSPG5O95196 566 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 BAG2O95816 211 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 MT-CO1P00395 513 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 ACRP10323 421 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 EEF1DP29692 281 aaKnown RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 RGS4P49798 205 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 C1QTNF8P60827 252 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 HTRA4P83105 476 aaPredicted RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 ZXDBP98169 803 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 TSNQ15631 228 aaKnown RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 GPR33Q49SQ1 333 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 SETMARQ53H47 684 aaPredicted RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 ARHGAP15Q53QZ3 475 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 CTSL3PQ5NE16 218 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 PPM1LQ5SGD2 360 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 KANK2Q63ZY3 851 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 MAMSTRQ6ZN01 415 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 LARP4Q71RC2 724 aaKnown RBP eCLIP8.12□□□□□ -1.115e-14■□□□□ 9.2
UBR4-202ENST00000375224 LYSMD3Q7Z3D4 306 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 SNX20Q7Z614 316 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 GPSM1Q86YR5 675 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 CAMK1DQ8IU85 385 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 RBFAQ8N0V3 343 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 CBARPQ8N350 705 aaPredicted RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 TTC16Q8NEE8 873 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 SLC26A7Q8TE54 656 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 SH3RF2Q8TEC5 729 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 GAB3Q8WWW8 586 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 CLP1Q92989 425 aaKnown RBP8.12□□□□□ -1.11
UBR4-202ENST00000375224 TM6SF2Q9BZW4 377 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 GNPTGQ9UJJ9 305 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 LZTS1Q9Y250 596 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 DHRS7Q9Y394 339 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 IRAK3Q9Y616 596 aa8.12□□□□□ -1.11
UBR4-202ENST00000375224 SCAMP3O14828 347 aaKnown RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 SNRPB2P08579 225 aaKnown RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 RPS17P08708 135 aaKnown RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 ENO3P13929 434 aaPredicted RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 CTPS1P17812 591 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 HMOX2P30519 316 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 CDKN1CP49918 316 aaPredicted RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 CRY1Q16526 586 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 TJAP1Q5JTD0 557 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 PTRHD1Q6GMV3 140 aaKnown RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 TUBA3EQ6PEY2 450 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 FBXO46Q6PJ61 603 aaPredicted RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 TPGS1Q6ZTW0 290 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 OTOP2Q7RTS6 562 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 HPS6Q86YV9 775 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 OR2AP1Q8NGE2 309 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 OR56A4Q8NGH8 313 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 CD200R1Q8TD46 325 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 FUBP1Q96AE4 644 aaKnown RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 LINGO1Q96FE5 620 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 CDRT15Q96T59 188 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 P2RY12Q9H244 342 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 NUDT4Q9NZJ9 180 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 SLC25A13Q9UJS0 675 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 COQ6Q9Y2Z9 468 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 TNPO3Q9Y5L0 923 aaKnown RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 A0A1W2PRU2 124 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 BBIP1A8MTZ0 92 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 GRM6O15303 877 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 NIPSNAP2O75323 286 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 ME2P23368 584 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 ITGB8P26012 769 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 CDH13P55290 713 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 SH3BP2P78314 561 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 PPIGQ13427 754 aaKnown RBP eCLIP8.11□□□□□ -1.113e-8■■□□□ 12.8
UBR4-202ENST00000375224 PTK2BQ14289 1009 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 C16orf72Q14CZ0 275 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 UGT3A2Q3SY77 523 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 AGKQ53H12 422 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 ZDHHC20Q5W0Z9 365 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 CLEC6AQ6EIG7 209 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 ZFP1Q6P2D0 407 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 ADAMTSL2Q86TH1 951 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 CHCHD4Q8N4Q1 142 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 SIDT2Q8NBJ9 832 aaKnown RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 TNIP2Q8NFZ5 429 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 TWIST2Q8WVJ9 160 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 GIMAP1Q8WWP7 306 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 DLG3Q92796 817 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 ARMC5Q96C12 935 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 CCDC124Q96CT7 223 aaKnown RBP8.11□□□□□ -1.11
UBR4-202ENST00000375224 MARK4Q96L34 752 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 HGH1Q9BTY7 390 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 CD274Q9NZQ7 290 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 ZMYM5Q9UJ78 669 aa8.11□□□□□ -1.11
UBR4-202ENST00000375224 C1orf232A0A0U1RR37 186 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 NPEPPSL1A6NEC2 478 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 CAPN8A6NHC0 703 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 K7ERQ8 282 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 SMAD6O43541 496 aaKnown RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 OR1I1O60431 355 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 SIX3O95343 332 aaPredicted RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 FGBP02675 491 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 UBL4AP11441 157 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 LBPP18428 481 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms