RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 H3BMM5 538 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 SRP72O76094 671 aaKnown RBP15.36■□□□□ 0.05
CCDC40-202ENST00000374876 LINGO3P0C6S8 592 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 UBTFL6P0CB48 400 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-202ENST00000374876 GFAPP14136 432 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 CR2P20023 1033 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 AVPR2P30518 371 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 CD70P32970 193 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 MRPS22P82650 360 aaKnown RBP15.36■□□□□ 0.05
CCDC40-202ENST00000374876 C2orf27AQ580R0 203 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 SFT2D3Q587I9 215 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 MPP7Q5T2T1 576 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 TERB1Q8NA31 727 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 LPCAT1Q8NF37 534 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 BHLHE22Q8NFJ8 381 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-202ENST00000374876 TCF12Q99081 682 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 OSBPL6Q9BZF3 934 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 ABCB8Q9NUT2 735 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 ATP6AP2A0A1C7CYW4 349 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 PEX1O43933 1283 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 ATP6AP2O75787 350 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 SIX3O95343 332 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-202ENST00000374876 MT-CO1P00395 513 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 SNRPB2P08579 225 aaKnown RBP15.36■□□□□ 0.05
CCDC40-202ENST00000374876 AQP4P55087 323 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 STX1BP61266 288 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 PSME3P61289 254 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 SH3BP2P78314 561 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 MS4A2Q01362 244 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 RAD51Q06609 339 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 GAS6Q14393 721 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 CYTH1Q15438 398 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 GRAMD1BQ3KR37 738 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 RNF219Q5W0B1 726 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-202ENST00000374876 LARP4Q71RC2 724 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCDC40-202ENST00000374876 MDGA1Q8NFP4 955 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 HMGCLL1Q8TB92 370 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 STAG3L4Q8TBR4 150 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 LPGAT1Q92604 370 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 DLG3Q92796 817 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 CLDN23Q96B33 292 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 ADGRE3Q9BY15 652 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 MID1IP1Q9NPA3 183 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 MRPL40Q9NQ50 206 aaKnown RBP15.36■□□□□ 0.05
CCDC40-202ENST00000374876 CACNA2D2Q9NY47 1150 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 RNF112Q9ULX5 631 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 PCDHGC4Q9Y5F7 938 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 RAI2Q9Y5P3 530 aa15.36■□□□□ 0.05
CCDC40-202ENST00000374876 TRIM38O00635 465 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 KIF1CO43896 1103 aaKnown RBP15.35■□□□□ 0.05
CCDC40-202ENST00000374876 BCAS2O75934 225 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-202ENST00000374876 PRLP01236 227 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 MTHFD2P13995 350 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 TCN1P20061 433 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-202ENST00000374876 LPOP22079 712 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-202ENST00000374876 DGKKQ5KSL6 1271 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 TMEM215Q68D42 235 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 REP15Q6BDI9 236 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 PAQR3Q6TCH7 311 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 PCDH20Q8N6Y1 951 aaKnown RBP15.35■□□□□ 0.05
CCDC40-202ENST00000374876 ICA1LQ8NDH6 482 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 FIBINQ8TAL6 211 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 KIAA1191Q96A73 305 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 LRGUKQ96M69 825 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 ATOH8Q96SQ7 321 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 SLC25A23Q9BV35 468 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 SLC2A11Q9BYW1 496 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 DERL2Q9GZP9 239 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 SUFUQ9UMX1 484 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 VPS9D1Q9Y2B5 631 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 TBC1D30Q9Y2I9 924 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 PCDHGA7Q9Y5G6 932 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 KIAA1549LQ6ZVL6 1849 aa15.35■□□□□ 0.05
CCDC40-202ENST00000374876 CHD5Q8TDI0 1954 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 SUPT3HB4E1H0 165 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 PFDN6O15212 129 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 KERAO60938 352 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 SUPT3HO75486 399 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 CDK14O94921 469 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 LYNP07948 512 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 TIE1P35590 1138 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 ATXN3P54252 364 aaPredicted RBP15.34■□□□□ 0.05
CCDC40-202ENST00000374876 ATP6V0D1P61421 351 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 LMAN2Q12907 356 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 CDH18Q13634 790 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 LRRC32Q14392 662 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 UGT3A2Q3SY77 523 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 OGFRL1Q5TC84 451 aaPredicted RBP15.34■□□□□ 0.05
CCDC40-202ENST00000374876 CYHR1Q6ZMK1 362 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 C2orf42Q9NWW7 574 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 HCN2Q9UL51 889 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 SLC27A6Q9Y2P4 619 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 DTNAQ9Y4J8 743 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 DNAJC15Q9Y5T4 150 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 AZIN1O14977 448 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 PYGLP06737 847 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 FGF4P08620 206 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 UQCRBP14927 111 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 ATP4BP51164 291 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 MTAPQ13126 283 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms