RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 OR6C75A6NL08 312 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 LSM1O15116 133 aaKnown RBP12.59□□□□□ -0.39
CTPS1-202ENST00000372621 ACSL4O60488 711 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 PFDN1O60925 122 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 TULP3O75386 442 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 CLCN7P51798 805 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 CDH4P55283 916 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 GRSF1Q12849 480 aaKnown RBP eCLIP12.59□□□□□ -0.39
CTPS1-202ENST00000372621 PCBP2Q15366 365 aaKnown RBP eCLIP12.59□□□□□ -0.392e-7■■■■□ 26
CTPS1-202ENST00000372621 CPNE9Q8IYJ1 553 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 B3GALT6Q96L58 329 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 RNF145Q96MT1 663 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 TUBA1CQ9BQE3 449 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 PIF1Q9H611 641 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 POLR1BQ9H9Y6 1135 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 LMCD1Q9NZU5 365 aa12.59□□□□□ -0.39
CTPS1-202ENST00000372621 H7C0S8 307 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 SEPT4O43236 478 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 POLR2IP36954 125 aaKnown RBP12.58□□□□□ -0.39
CTPS1-202ENST00000372621 HTR6P50406 440 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 KIAA0040Q15053 153 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 PLCL1Q15111 1095 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 FAM117BQ6P1L5 589 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 RSPO2Q6UXX9 243 aaPredicted RBP12.58□□□□□ -0.39
CTPS1-202ENST00000372621 RALGPS2Q86X27 583 aaPredicted RBP12.58□□□□□ -0.39
CTPS1-202ENST00000372621 RASAL3Q86YV0 1011 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 PNPT1Q8TCS8 783 aaKnown RBP12.58□□□□□ -0.39
CTPS1-202ENST00000372621 NSMCE2Q96MF7 247 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 DCUN1D5Q9BTE7 237 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 P2RY12Q9H244 342 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 SCUBE2Q9NQ36 999 aa12.58□□□□□ -0.39
CTPS1-202ENST00000372621 ANKRD66B4E2M5 251 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 OR7A17O14581 309 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 GIPC1O14908 333 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 ALPLP05186 524 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 G6PDP11413 515 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 ARSFP54793 590 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 GPR107Q5VW38 600 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 DUS1LQ6P1R4 473 aaKnown RBP12.58□□□□□ -0.4
CTPS1-202ENST00000372621 TRAF7Q6Q0C0 670 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 RNF19BQ6ZMZ0 732 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 TERB1Q8NA31 727 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 LPCAT1Q8NF37 534 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 PDLIM5Q96HC4 596 aaKnown RBP12.58□□□□□ -0.4
CTPS1-202ENST00000372621 GPR62Q9BZJ7 368 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 NUDT4Q9NZJ9 180 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 PKD2L2Q9NZM6 624 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 IFT80Q9P2H3 777 aaPredicted RBP12.58□□□□□ -0.4
CTPS1-202ENST00000372621 PCDHGC4Q9Y5F7 938 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 COMMD10Q9Y6G5 202 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 V9GYQ6 96 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 RSL1D1O76021 490 aaKnown RBP12.58□□□□□ -0.4
CTPS1-202ENST00000372621 TCF3P15923 654 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 GGT1P19440 569 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 YAP1P46937 504 aaKnown RBP12.58□□□□□ -0.4
CTPS1-202ENST00000372621 ALDH3A2P51648 485 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 OXCT1P55809 520 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 RPS24P62847 133 aaKnown RBP12.58□□□□□ -0.4
CTPS1-202ENST00000372621 TRIM32Q13049 653 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 GPR17Q13304 367 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 MBTPS1Q14703 1052 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 PTPRRQ15256 657 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 AAK1Q2M2I8 961 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 FAM171A1Q5VUB5 890 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 TMEM214Q6NUQ4 689 aaKnown RBP12.58□□□□□ -0.4
CTPS1-202ENST00000372621 CYP20A1Q6UW02 462 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 TMEM26Q6ZUK4 368 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 TTC30BQ8N4P2 665 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 NUDT8Q8WV74 236 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 MUS81Q96NY9 551 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 CGREF1Q99674 301 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 SEPT5Q99719 369 aaPredicted RBP12.58□□□□□ -0.4
CTPS1-202ENST00000372621 NAA50Q9GZZ1 169 aaKnown RBP12.58□□□□□ -0.4
CTPS1-202ENST00000372621 AGO1Q9UL18 857 aaKnown RBP12.58□□□□□ -0.4
CTPS1-202ENST00000372621 CCL27Q9Y4X3 112 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 RAI2Q9Y5P3 530 aa12.58□□□□□ -0.4
CTPS1-202ENST00000372621 MANSC4A6NHS7 340 aaPredicted RBP12.57□□□□□ -0.4
CTPS1-202ENST00000372621 IFRD1O00458 451 aaPredicted RBP12.57□□□□□ -0.4
CTPS1-202ENST00000372621 MAGEB3O15480 346 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 CAPN1P07384 714 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 INHBBP09529 407 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 RAP2AP10114 183 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 MTPNP58546 118 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 C18orf21Q32NC0 220 aaPredicted RBP12.57□□□□□ -0.4
CTPS1-202ENST00000372621 MFSD14CQ5VZR4 134 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 Q6ZNX1 250 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 CHST15Q7LFX5 561 aaPredicted RBP12.57□□□□□ -0.4
CTPS1-202ENST00000372621 ITIH5Q86UX2 942 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 OR13F1Q8NGS4 319 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 PPM1MQ96MI6 270 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 ZNF583Q96ND8 569 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 CCDC115Q96NT0 180 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 SPON2Q9BUD6 331 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 TBC1D4O60343 1298 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 ESR1P03372 595 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 JUNBP17275 347 aaPredicted RBP12.57□□□□□ -0.4
CTPS1-202ENST00000372621 JAK1P23458 1154 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 ARPP19P56211 112 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 PWP1Q13610 501 aa12.57□□□□□ -0.4
CTPS1-202ENST00000372621 FGD3Q5JSP0 725 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms