RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 NDUFS2O75306 463 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 KATNA1O75449 491 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 MFN2O95140 757 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 GSNP06396 782 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 LTA4HP09960 611 aaKnown RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 DBTP11182 482 aaKnown RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF37AP17032 561 aaPredicted RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CD40LGP29965 261 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ACADSBP45954 432 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 LEPRP48357 1165 aaKnown RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TUFMP49411 452 aaKnown RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CLK3P49761 638 aaKnown RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CYP4F2P78329 520 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 FAM189BP81408 668 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TIAL1Q01085 375 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 IL5RAQ01344 420 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CYP4F3Q08477 520 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 NAB1Q13506 487 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TRIP4Q15650 581 aaPredicted RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 SNAP47Q5SQN1 464 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 LCN8Q6JVE9 175 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 METTL7BQ6UX53 244 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CLEC20AQ6ZU45 233 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 MOB2Q70IA6 237 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 THAP5Q7Z6K1 395 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 UBE2Q1Q7Z7E8 422 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF354CQ86Y25 554 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CDYL2Q8N8U2 506 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ARRDC4Q8NCT1 418 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 OR7A2PQ8NGA2 310 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 OR13C4Q8NGS5 318 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 SCAMP5Q8TAC9 235 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 MCOLN3Q8TDD5 553 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 RAB2BQ8WUD1 216 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 FAR1Q8WVX9 515 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ATL1Q8WXF7 558 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 WNT8BQ93098 351 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ITPKCQ96DU7 683 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 DUS3LQ96G46 650 aaKnown RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 CDHR1Q96JP9 859 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 SPATA17Q96L03 361 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TBATAQ96M53 351 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 OSMRQ99650 979 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 FSD1LQ9BXM9 530 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 SLC39A8Q9C0K1 460 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ZFAND3Q9H8U3 227 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TXNRD2Q9NNW7 524 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ADPRHL2Q9NX46 363 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TAS2R16Q9NYV7 291 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 COQ3Q9NZJ6 369 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TBC1D14Q9P2M4 693 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ABCD2Q9UBJ2 740 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ZMAT5Q9UDW3 170 aaKnown RBP5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ENPP5Q9UJA9 477 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ERVK-11Q9UQG0 969 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 PDE10AQ9Y233 779 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF451Q9Y4E5 1061 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 ARL5AQ9Y689 179 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 C5orf42Q9H799 3197 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 TTC3P53804 2025 aa5.36□□□□□ -1.55
ATG4A-204ENST00000372246 MYBPHLA2RUH7 354 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 IQCF5A8MTL0 148 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 J3KR12 359 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF701M0R085 212 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SLC1A7O00341 560 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PRMT5O14744 637 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SLC22A2O15244 555 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CLASP2O75122 1294 aaKnown RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 UGT2B11O75310 529 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 RECQL4O94761 1208 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PRKD3O94806 890 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PAPSS2O95340 614 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CST1P01037 141 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 UGT2B4P06133 528 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 APOA4P06727 396 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CDH1P12830 882 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 MTHFD2P13995 350 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 EFNA1P20827 205 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SDHBP21912 280 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PCMT1P22061 227 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 WEE1P30291 646 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ATICP31939 592 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 GRK5P34947 590 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 TGM4P49221 684 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 FKBP1AP62942 108 aaKnown RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 DSC2Q02487 901 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 YWHAHQ04917 246 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 GRSF1Q12849 480 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 DAG1Q14118 895 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF846Q147U1 533 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PTCHD3Q3KNS1 767 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CCDC58Q4VC31 144 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PCID2Q5JVF3 399 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF648Q5T619 568 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 C9orf57Q5W0N0 161 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SULT1C3Q6IMI6 304 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 C4orf22Q6V702 233 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CATSPERGQ6ZRH7 1159 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 KIAA0408Q6ZU52 694 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 C11orf96Q7Z7L8 435 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms