RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CFAP36Q96G28 342 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 EBNA1BP2Q99848 306 aaKnown RBP14.59□□□□□ -0.07
COL9A1-204ENST00000370496 PRDM8Q9NQV8 689 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 C20orf96Q9NUD7 363 aaPredicted RBP14.59□□□□□ -0.07
COL9A1-204ENST00000370496 IL1RAPL1Q9NZN1 696 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 DNMT3AQ9Y6K1 912 aaPredicted RBP14.59□□□□□ -0.07
COL9A1-204ENST00000370496 PIKFYVEQ9Y2I7 2098 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 UBA6A0AVT1 1052 aaPredicted RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 EME2A4GXA9 379 aaPredicted RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 KLHL33A6NCF5 533 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 RHPN2P1A8MT19 583 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 OR1I1O60431 355 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 KCNJ13O60928 360 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 NDUFS3O75489 264 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 TTC4O95801 387 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 EML2O95834 649 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 FTH1P02794 183 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 OR56A5P0C7T3 313 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 CDK4P11802 303 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 OGNP20774 298 aaKnown RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 RPL10P27635 214 aaKnown RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 ELK3P41970 407 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 HALP42357 657 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 DRG2P55039 364 aaKnown RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 CAV1Q03135 178 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 PDIA2Q13087 525 aaKnown RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 NFE2L1Q14494 772 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 SPANXN3Q5MJ09 141 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 HP1BP3Q5SSJ5 553 aaPredicted RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 RNF187Q5TA31 235 aaPredicted RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 OGFOD3Q6PK18 319 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 DHRS13Q6UX07 377 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 CENPUQ71F23 418 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 TRIM48Q8IWZ4 208 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 MMGT1Q8N4V1 131 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 NOA1Q8NC60 698 aaKnown RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 LRRC39Q96DD0 335 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 LINC00615Q96LM1 132 aaPredicted RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 FCRL3Q96P31 734 aaPredicted RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 CCDC3Q9BQI4 270 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 LRRC1Q9BTT6 524 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 TSSK1BQ9BXA7 367 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 ZMYND15Q9H091 742 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 ABCG4Q9H172 646 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 GRHL1Q9NZI5 618 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 ZC3H7BQ9UGR2 993 aaKnown RBP14.58□□□□□ -0.08
COL9A1-204ENST00000370496 RNF215Q9Y6U7 377 aa14.58□□□□□ -0.08
COL9A1-204ENST00000370496 KIR2DS5A0A0G2JLQ3 304 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 A0A0G2JNG1 304 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 ZCWPW2A0A1B0GU75 182 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 ESYT3A0FGR9 886 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 A6NCN8 305 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 MGAT4DA6NG13 374 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 KIR2DS3K7RE56 304 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 TP73O15350 636 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 SGTAO43765 313 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 NUDT21O43809 227 aaKnown RBP14.57□□□□□ -0.08
COL9A1-204ENST00000370496 DKK1O94907 266 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 SLC35G4P0C7Q5 338 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 GLB1P16278 677 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 ARCN1P48444 511 aaKnown RBP14.57□□□□□ -0.08
COL9A1-204ENST00000370496 PPM1FP49593 454 aaPredicted RBP14.57□□□□□ -0.08
COL9A1-204ENST00000370496 PLTPP55058 493 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 EIF3BP55884 814 aaKnown RBP14.57□□□□□ -0.08
COL9A1-204ENST00000370496 GUCY2DQ02846 1103 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 KIR2DS5Q14953 304 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 SYTL3Q4VX76 610 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 PERM1Q5SV97 790 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 NEPROQ6NW34 567 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 FAM83HQ6ZRV2 1179 aaPredicted RBP14.57□□□□□ -0.08
COL9A1-204ENST00000370496 KCNMB4Q86W47 210 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 CCNJLQ8IV13 435 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 ANKMY2Q8IV38 441 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 ZBED8Q8IZ13 594 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 SFRP1Q8N474 314 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 ARL14Q8N4G2 192 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 AVL9Q8NBF6 648 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 OR2L2Q8NH16 312 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 GABPB2Q8TAK5 448 aaPredicted RBP14.57□□□□□ -0.08
COL9A1-204ENST00000370496 ADAMTS14Q8WXS8 1223 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 CCM2Q9BSQ5 444 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 FAM167BQ9BTA0 163 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 CARD6Q9BX69 1037 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 LRIT1Q9P2V4 623 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 GNPTGQ9UJJ9 305 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 VPS9D1Q9Y2B5 631 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 PRSS21Q9Y6M0 314 aa14.57□□□□□ -0.08
COL9A1-204ENST00000370496 CACNA1AO00555 2505 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 TRBV23OR9-2A0A075B6M9 112 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 OR5K4A6NMS3 321 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 PRMT5O14744 637 aaPredicted RBP14.56□□□□□ -0.08
COL9A1-204ENST00000370496 ADRB1P08588 477 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 GSTM1P09488 218 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 E2F1Q01094 437 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 GSTM4Q03013 218 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 HHEXQ03014 270 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 BOP1Q14137 746 aaKnown RBP14.56□□□□□ -0.08
COL9A1-204ENST00000370496 TYSND1Q2T9J0 566 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 AGAP9Q5VTM2 703 aa14.56□□□□□ -0.08
COL9A1-204ENST00000370496 PTRHD1Q6GMV3 140 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms