RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SLC30A3Q99726 388 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 CIPCQ9C0C6 399 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 MUC13Q9H3R2 512 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 SARS2Q9NP81 518 aaKnown RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 LATS2Q9NRM7 1088 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 TMEM181Q9P2C4 612 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 TBC1D14Q9P2M4 693 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 FNDC3AQ9Y2H6 1198 aaKnown RBP13.84□□□□□ -0.19
USF1-202ENST00000368020 OARD1Q9Y530 152 aa13.84□□□□□ -0.19
USF1-202ENST00000368020 A0A1W2PRU2 124 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 GRXCR2A6NFK2 248 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 SMAD6O43541 496 aaKnown RBP13.83□□□□□ -0.2
USF1-202ENST00000368020 XYLBO75191 536 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 POP4O95707 220 aaKnown RBP13.83□□□□□ -0.2
USF1-202ENST00000368020 NPPAP01160 153 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 C8BP07358 591 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 MSH3P20585 1137 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 HNF1BP35680 557 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 NSG1P42857 185 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 PIK3CGP48736 1102 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 EPHA5P54756 1037 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 POLR2LP62875 67 aaKnown RBP13.83□□□□□ -0.2
USF1-202ENST00000368020 ERVK-8P63133 956 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 ADGRE1Q14246 886 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 CDKN3Q16667 212 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 MYLK3Q32MK0 819 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 C22orf39Q6P5X5 142 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 RNF165Q6ZSG1 346 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 KBTBD2Q8IY47 623 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 MINDY1Q8N5J2 469 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 BHMTQ93088 406 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 PBXIP1Q96AQ6 731 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 EID2BQ96D98 161 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 ECHDC3Q96DC8 303 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 ASIC4Q96FT7 647 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 SCRN2Q96FV2 425 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 DUS3LQ96G46 650 aaKnown RBP13.83□□□□□ -0.2
USF1-202ENST00000368020 PLEKHG4BQ96PX9 1271 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 SMIM14Q96QK8 99 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 BRINP2Q9C0B6 783 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 TTYH1Q9H313 450 aaPredicted RBP13.83□□□□□ -0.2
USF1-202ENST00000368020 IL26Q9NPH9 171 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 DZANK1Q9NVP4 752 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 PDP2Q9P2J9 529 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 ADAMTS6Q9UKP5 1117 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 DOCK6Q96HP0 2047 aa13.83□□□□□ -0.2
USF1-202ENST00000368020 NCF1BA6NI72 391 aaPredicted RBP13.82□□□□□ -0.2
USF1-202ENST00000368020 AGAP14A8MT82 685 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 NCF1CA8MVU1 366 aaPredicted RBP13.82□□□□□ -0.2
USF1-202ENST00000368020 IFRD1O00458 451 aaPredicted RBP13.82□□□□□ -0.2
USF1-202ENST00000368020 GAPDHSO14556 408 aaPredicted RBP13.82□□□□□ -0.2
USF1-202ENST00000368020 SRCP12931 536 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 NCF1P14598 390 aaPredicted RBP13.82□□□□□ -0.2
USF1-202ENST00000368020 UQCRBP14927 111 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 PCSK2P16519 638 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 CD70P32970 193 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 DPP6P42658 865 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 ERFP50548 548 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 KCNK10P57789 538 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 MRPS22P82650 360 aaKnown RBP13.82□□□□□ -0.2
USF1-202ENST00000368020 BNIP2Q12982 314 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 MED21Q13503 144 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 SMU1Q2TAY7 513 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 PDCD4Q53EL6 469 aaKnown RBP13.82□□□□□ -0.2
USF1-202ENST00000368020 PRR23BQ6ZRT6 265 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 SYVN1Q86TM6 617 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 HS6ST3Q8IZP7 471 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 NXPE1Q8N323 547 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 ZBTB2Q8N680 514 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 SHKBP1Q8TBC3 707 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 OTUB2Q96DC9 234 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 LMLNQ96KR4 655 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 MCCC1Q96RQ3 725 aaPredicted RBP13.82□□□□□ -0.2
USF1-202ENST00000368020 CORO1BQ9BR76 489 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 TRIM54Q9BYV2 358 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 TUBB1Q9H4B7 451 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 RDH14Q9HBH5 336 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 AIG1Q9NVV5 245 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 GEMIN8Q9NWZ8 242 aaKnown RBP13.82□□□□□ -0.2
USF1-202ENST00000368020 ZIM2Q9NZV7 527 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 GALPQ9UBC7 116 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 CD300AQ9UGN4 299 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 SUN2Q9UH99 717 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 IKZF3Q9UKT9 509 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 CNOT11Q9UKZ1 510 aaKnown RBP13.82□□□□□ -0.2
USF1-202ENST00000368020 DTNAQ9Y4J8 743 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 BRWD1Q9NSI6 2320 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 ANKRD12Q6UB98 2062 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 PIKFYVEQ9Y2I7 2098 aa13.82□□□□□ -0.2
USF1-202ENST00000368020 C15orf38-AP3S2A0A0A6YYH1 394 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 PRSS51A0A1B0GVH4 220 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 A6NHS1 94 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 LRRC14BA6NHZ5 514 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 E7ENX8 843 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 NR5A2O00482 541 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 SCAMP3O14828 347 aaKnown RBP13.81□□□□□ -0.2
USF1-202ENST00000368020 FFAR2O15552 330 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 ZNF821O75541 412 aaPredicted RBP13.81□□□□□ -0.2
USF1-202ENST00000368020 CLDN7O95471 211 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 LINC00032P0C843 101 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms