RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 OTUD3Q5T2D3 398 aaPredicted RBP3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 CCNYL2Q5T2Q4 361 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZDHHC20Q5W0Z9 365 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 DGLUCYQ7Z3D6 616 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 LONP2Q86WA8 852 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 RDM1Q8NG50 284 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZNF524Q96C55 264 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZNF501Q96CX3 271 aaPredicted RBP3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 DDOQ99489 341 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 BARD1Q99728 777 aaKnown RBP3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 HGH1Q9BTY7 390 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 DNAJC18Q9H819 358 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 BLOC1S4Q9NUP1 217 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 GAB2Q9UQC2 676 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 TCF19Q9Y242 345 aa3.01□□□□□ -1.93
RNU4-48P-201ENST00000365559 TEX13DA0A0J9YY54 714 aaPredicted RBP3□□□□□ -1.93
RNU4-48P-201ENST00000365559 AGAP14A8MT82 685 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 FAM72CH0Y354 149 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 VILLO15195 856 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 PAK4O96013 591 aaPredicted RBP3□□□□□ -1.93
RNU4-48P-201ENST00000365559 GH2P01242 217 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 TUBBP07437 444 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 MSH3P20585 1137 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 NMBRP28336 390 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 CDKN1AP38936 164 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 CRIP2P52943 208 aaPredicted RBP3□□□□□ -1.93
RNU4-48P-201ENST00000365559 KIF26BQ2KJY2 2108 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 WDR38Q5JTN6 314 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 FAM72AQ5TYM5 149 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 FAM72DQ6L9T8 149 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 SLC27A1Q6PCB7 646 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 PACS1Q6VY07 963 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 C4orf50Q6ZRC1 276 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 FAM72BQ86X60 149 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 PTOV1Q86YD1 416 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 ARID3BQ8IVW6 561 aaPredicted RBP3□□□□□ -1.93
RNU4-48P-201ENST00000365559 TMTC2Q8N394 836 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 FCAMRQ8WWV6 532 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 SMPDL3BQ92485 455 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 STAMBPL1Q96FJ0 436 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 SLC22A12Q96S37 553 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 C1QTNF1Q9BXJ1 281 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 SMARCAD1Q9H4L7 1026 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 SLC38A7Q9NVC3 462 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 PTTG2Q9NZH5 202 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 JRKLQ9Y4A0 524 aa3□□□□□ -1.93
RNU4-48P-201ENST00000365559 SEC23IPQ9Y6Y8 1000 aaKnown RBP3□□□□□ -1.93
RNU4-48P-201ENST00000365559 KIAA1210Q9ULL0 1709 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 FSD2A1L4K1 749 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 C15orf62A8K5M9 175 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 PMS2P5A8MQ11 134 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 MITFO75030 526 aaPredicted RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 RSL1D1O76021 490 aaKnown RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 GAS8-AS1O95177 125 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 MMP9P14780 707 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 PSMB10P40306 273 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 DRG2P55039 364 aaKnown RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 MFAP4P55083 255 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 MRPS5P82675 430 aaKnown RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 KCNC3Q14003 757 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 DUOXA1Q1HG43 343 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 TECRLQ5HYJ1 363 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 NDUFAF5Q5TEU4 345 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 FAM205BPQ63HN1 556 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 SLC35E4Q6ICL7 350 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 GSG1LQ6UXU4 331 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 CEACAM20Q6UY09 585 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 AACSQ86V21 672 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 STPG4Q8N801 248 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 OR10V1Q8NGI7 309 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZNF473Q8WTR7 871 aaKnown RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 TM9SF4Q92544 642 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 SEMA4DQ92854 862 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 FBXO17Q96EF6 278 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 FAM120BQ96EK7 910 aaKnown RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZNF582Q96NG8 517 aaPredicted RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 DACH2Q96NX9 599 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 TREX2Q9BQ50 279 aaPredicted RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 PSD2Q9BQI7 771 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 GHITMQ9H3K2 345 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 HRH4Q9H3N8 390 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 SLA2Q9H6Q3 261 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZNF696Q9H7X3 374 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 APOBEC3GQ9HC16 384 aaKnown RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 SCRT2Q9NQ03 307 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 DNAJB4Q9UDY4 337 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 ERRFI1Q9UJM3 462 aaPredicted RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 PNMA2Q9UL42 364 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 ZNF215Q9UL58 517 aaPredicted RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 LAS1LQ9Y4W2 734 aaKnown RBP2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 PCDHGA5Q9Y5G8 931 aa2.99□□□□□ -1.93
RNU4-48P-201ENST00000365559 A6NCN8 305 aa2.98□□□□□ -1.93
RNU4-48P-201ENST00000365559 H0YIN7 160 aa2.98□□□□□ -1.93
RNU4-48P-201ENST00000365559 NDUFS4O43181 175 aa2.98□□□□□ -1.93
RNU4-48P-201ENST00000365559 CIDEAO60543 219 aa2.98□□□□□ -1.93
RNU4-48P-201ENST00000365559 GJB3O75712 270 aa2.98□□□□□ -1.93
RNU4-48P-201ENST00000365559 TSHBP01222 138 aa2.98□□□□□ -1.93
RNU4-48P-201ENST00000365559 NR3C1P04150 777 aa2.98□□□□□ -1.93
RNU4-48P-201ENST00000365559 PRLRP16471 622 aa2.98□□□□□ -1.93
RNU4-48P-201ENST00000365559 CBLP22681 906 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms