RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 MASP1P48740 699 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 MAMLD1Q13495 774 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 CARTPTQ16568 116 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 RBM48Q5RL73 367 aaKnown RBP9.21□□□□□ -0.94
VPS13A-203ENST00000360280 RHOJQ9H4E5 214 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF20P17024 532 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 IL12BP29460 328 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 SCARF1Q14162 830 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 XKR4Q5GH76 650 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 RNASEH2BQ5TBB1 312 aaKnown RBP9.21□□□□□ -0.94
VPS13A-203ENST00000360280 NSMCE3Q96MG7 304 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 KCNN3Q9UGI6 736 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 ADGRB3O60242 1522 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 NCANO14594 1321 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 SLC1A2P43004 574 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 CLCN7P51798 805 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 CD83Q01151 205 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 C9orf64Q5T6V5 341 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 IQSEC1Q6DN90 963 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 SATL1Q86VE3 508 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 CD300LFQ8TDQ1 290 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 ANKHQ9HCJ1 492 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 HACL1Q9UJ83 578 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 ALKQ9UM73 1620 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 NWD1Q149M9 1564 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 CD40LGP29965 261 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 AIMP2Q13155 320 aaKnown RBP9.21□□□□□ -0.94
VPS13A-203ENST00000360280 OGFOD2Q6N063 350 aa9.21□□□□□ -0.94
VPS13A-203ENST00000360280 SH3D21A4FU49 640 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 MOXD2PA6NHM9 499 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TOMM5Q8N4H5 51 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 SLC43A3Q8NBI5 491 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 METTL21AQ8WXB1 218 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TMEM68Q96MH6 324 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 BRD7Q9NPI1 651 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TMED5Q9Y3A6 229 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 GRIN2DO15399 1336 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CENPBD1B2RD01 187 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 SCELO95171 688 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 VAMP1P23763 118 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 AQP1P29972 269 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 BLMHQ13867 455 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CRYBG2Q8N1P7 616 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 THRSPQ92748 146 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 KAT2AQ92830 837 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 RANBP3Q9H6Z4 567 aaPredicted RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 DAPL1A0PJW8 107 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TRUB2O95900 331 aaKnown RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CHKAP35790 457 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 MC1RQ01726 317 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 KLHL36Q8N4N3 616 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF70Q9UC06 446 aaPredicted RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 DPPA5A6NC42 116 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 A8MX80 341 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 THEGLP0DJG4 465 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CCR10P46092 362 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TMBIM6P55061 237 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 LPCAT4Q643R3 524 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 UBE2J2Q8N2K1 259 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 RPL36Q9Y3U8 105 aaKnown RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 PRKAB1Q9Y478 270 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 WASHC1A8K0Z3 465 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 WASH3PC4AMC7 463 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 M0R233 179 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 ACOX3O15254 700 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 COL6A2P12110 1019 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 PLEKHN1Q494U1 663 aaPredicted RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 WASH2PQ6VEQ5 465 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TMPRSS11BQ86T26 416 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CUZD1Q86UP6 607 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 PARGQ86W56 976 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 RGL4Q8IZJ4 473 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 OR14K1Q8NGZ2 314 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 AGO4Q9HCK5 861 aaKnown RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CNOT6Q9ULM6 557 aaKnown RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 PLLPQ9Y342 182 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 HTR2AP28223 471 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 GNPDA1P46926 289 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 PRKD1Q15139 912 aaPredicted RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CLIP4Q8N3C7 705 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 MFSD14AQ96MC6 490 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 MECRQ9BV79 373 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 VANGL1Q8TAA9 524 aaPredicted RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 DPAGT1Q9H3H5 408 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 ERVK-5Q9HDB9 667 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TMEM184CQ9NVA4 438 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 C3orf67Q6ZVT6 689 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CAND1Q86VP6 1230 aaKnown RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 GIMAP5Q96F15 307 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 UROC1Q96N76 676 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 UNKLQ9H9P5 680 aaKnown RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 PXMP2Q9NR77 195 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 RAP2AP10114 183 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 ANTXR2P58335 489 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CNPY1Q3B7I2 92 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 ECHDC2Q86YB7 292 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 DNAJB8Q8NHS0 232 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 C9orf43Q8TAL5 461 aaPredicted RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CFAP97Q9P2B7 532 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms