RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SPIBQ01892 262 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ILF2Q12905 390 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 MXD4Q14582 209 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ARHGAP19Q14CB8 494 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 GAGE13Q4V321 117 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF787Q6DD87 383 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CAVIN1Q6NZI2 390 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SCARA5Q6ZMJ2 495 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CCDC73Q6ZRK6 1079 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ARMCX2Q7L311 632 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CHST3Q7LGC8 479 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TRAPPC11Q7Z392 1133 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 USP37Q86T82 979 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 RASGEF1CQ8N431 466 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 UXS1Q8NBZ7 420 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 LILRB4Q8NHJ6 448 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SMARCC2Q8TAQ2 1214 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 FAM110BQ8TC76 370 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 KCNG4Q8TDN1 519 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 HCAR2Q8TDS4 363 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ADAMTS17Q8TE56 1095 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 OSBPL8Q9BZF1 889 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 MEGF9Q9H1U4 602 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ARRDC1-AS1Q9H2J1 176 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 RMI1Q9H9A7 625 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 DNAJB4Q9UDY4 337 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TUBGCP4Q9UGJ1 667 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SNX11Q9Y5W9 270 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 USP42Q9H9J4 1324 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 YLPM1P49750 1951 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 PALLDQ8WX93 1383 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 C9orf172C9J069 976 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 PGRMC2O15173 223 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 EIF3HO15372 352 aaKnown RBP eCLIP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 USP12O75317 370 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 MFN2O95140 757 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TGFAP01135 160 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 GBAP04062 536 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ITGB5P18084 799 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 EIF2AK2P19525 551 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SYT1P21579 422 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 MMP8P22894 467 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 KRT9P35527 623 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CACNA2D1P54289 1103 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 IQCB1Q15051 598 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 PTPAQ15257 358 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SMUG1Q53HV7 270 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 RESP18Q5W5W9 173 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ANKS6Q68DC2 871 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 PRR27Q6MZM9 219 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 HMBOX1Q6NT76 420 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 BTNL8Q6UX41 500 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 DPP8Q6V1X1 898 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SCD5Q86SK9 330 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF410Q86VK4 478 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 FAM185AQ8N0U4 392 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 NAGSQ8N159 534 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 OR52N4Q8NGI2 321 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TM4SF18Q96CE8 201 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 PGM2Q96G03 612 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TMX3Q96JJ7 454 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 IDI2Q9BXS1 227 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 GCOM2Q9BZD3 368 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 COQ10BQ9H8M1 238 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SYNPO2LQ9H987 977 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 DNAJC4Q9NNZ3 241 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SLC35C2Q9NQQ7 365 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 RPS6KA6Q9UK32 745 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 AMFRQ9UKV5 643 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ACTL7AQ9Y615 435 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TTC24A2A3L6 582 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TMEM89A2RUT3 159 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 LRRD1A4D1F6 860 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TMEM8BA6NDV4 472 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 H3BQF6 201 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CHST1O43916 411 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SCN2BO60939 215 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 IPO13O94829 963 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ITGB3P05106 788 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CCDC175P0C221 793 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 EPB41P11171 864 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 GNAT1P11488 350 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TPSB2P20231 275 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 GLRA2P23416 452 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 B3GALT5-AS1P59052 145 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 B2MP61769 119 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 RPL11P62913 178 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SLC18A2Q05940 514 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 NPRL3Q12980 569 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 MPP3Q13368 585 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SERTAD2Q14140 314 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TPSAB1Q15661 275 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 STXBP2Q15833 593 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 DPY19L1Q2PZI1 675 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 EFHC2Q5JST6 749 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CST9LP1Q5W188 147 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 RHBDF2Q6PJF5 856 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 BRAT1Q6PJG6 821 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SPATA24Q86W54 205 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 KBTBD3Q8NAB2 608 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms