RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ILKAPQ9H0C8 392 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 SLC28A3Q9HAS3 691 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 INTS10Q9NVR2 710 aaKnown RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 FAM8A1Q9UBU6 413 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 KRT87PA6NCN2 255 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 MAP3K7O43318 606 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 GRID2O43424 1007 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 DCXO43602 365 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 SOCS5O75159 536 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 TRIM16O95361 564 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 POLD2P49005 469 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 TTPAP49638 278 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 RELAQ04206 551 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 DLX2Q07687 328 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 C18orf21Q32NC0 220 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 ZNF648Q5T619 568 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 PIWIL4Q7Z3Z4 852 aaKnown RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 OSCP1Q8WVF1 389 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 PTCD3Q96EY7 689 aaKnown RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 LINGO1Q96FE5 620 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 RPP25Q9BUL9 199 aaKnown RBP12.5□□□□□ -0.41
GGPS1-202ENST00000358966 SARDHQ9UL12 918 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 RIMKLBQ9ULI2 386 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 WASF2Q9Y6W5 498 aa12.5□□□□□ -0.41
GGPS1-202ENST00000358966 GLYATL1P3A0A0U1RQE8 302 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 KRT36O76013 467 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 TSPAN12O95859 305 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 PFKLP17858 780 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 S100A1P23297 94 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 FSHRP23945 695 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 GRIA2P42262 883 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 ATP13A5Q4VNC0 1218 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 SPDYAQ5MJ70 313 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 AHI1Q8N157 1196 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 RDH11Q8TC12 318 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 DTX3LQ8TDB6 740 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 ECHDC3Q96DC8 303 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 MAELQ96JY0 434 aaKnown RBP12.49□□□□□ -0.41
GGPS1-202ENST00000358966 KCNA7Q96RP8 456 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 HACD3Q9P035 362 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 DKK3Q9UBP4 350 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 APOBEC2Q9Y235 224 aaKnown RBP12.49□□□□□ -0.41
GGPS1-202ENST00000358966 DOCK9Q9BZ29 2069 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 NUMA1Q14980 2115 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 LOC100653049A0A140TA62 436 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 ATP6AP2A0A1C7CYW4 349 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 CCDC85CA6NKD9 419 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 CAPN14A8MX76 684 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 SUPT3HB4E1H0 165 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 ATP6AP2O75787 350 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 KRT34O76011 436 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 C1SP09871 688 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 GFAPP14136 432 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 RPL14P50914 215 aaKnown RBP12.49□□□□□ -0.41
GGPS1-202ENST00000358966 PRKAA2P54646 552 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 CACNG1Q06432 222 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 KCNC3Q14003 757 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 GAB4Q2WGN9 574 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 LEMD2Q8NC56 503 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 BPIFB1Q8TDL5 484 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 PBXIP1Q96AQ6 731 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 SCRN2Q96FV2 425 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 CGREF1Q99674 301 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 KXD1Q9BQD3 176 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 HEPHQ9BQS7 1158 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 PLA2G2FQ9BZM2 168 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 SAR1AQ9NR31 198 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 CRLS1Q9UJA2 301 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 NOX1Q9Y5S8 564 aa12.49□□□□□ -0.41
GGPS1-202ENST00000358966 TMEM114B3SHH9 223 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 H7C0S8 307 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 MATN2O00339 956 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 TBX10O75333 385 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 POP4O95707 220 aaKnown RBP12.48□□□□□ -0.41
GGPS1-202ENST00000358966 CISD3P0C7P0 127 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 SUOXP51687 545 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 FOXA1P55317 472 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 CREB5Q02930 508 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 SLC34A1Q06495 639 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 GRIN2CQ14957 1233 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 PPP1R3AQ16821 1122 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 KCTD21Q4G0X4 260 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 NXNQ6DKJ4 435 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 GDPD4Q6W3E5 623 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 PCDH20Q8N6Y1 951 aaKnown RBP12.48□□□□□ -0.41
GGPS1-202ENST00000358966 KDM1BQ8NB78 822 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 ATOH8Q96SQ7 321 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 CCDC106Q9BWC9 280 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 GSTO2Q9H4Y5 243 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 GIMAP2Q9UG22 337 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 TRMT6Q9UJA5 497 aaKnown RBP12.48□□□□□ -0.41
GGPS1-202ENST00000358966 RNF112Q9ULX5 631 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 RAP2CQ9Y3L5 183 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 NUP210Q8TEM1 1887 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-202ENST00000358966 ADAM23O75077 832 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 ECI2O75521 394 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 RBP1P09455 135 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 ETV3P41162 512 aa12.48□□□□□ -0.41
GGPS1-202ENST00000358966 RECQLP46063 649 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-202ENST00000358966 HK3P52790 923 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms