RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ZNF607Q96SK3 696 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 SIRPGQ9P1W8 387 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 SLC2A6Q9UGQ3 507 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 MRPS23Q9Y3D9 190 aaKnown RBP13.58□□□□□ -0.24
VCP-201ENST00000358901 SESN1Q9Y6P5 492 aa13.58□□□□□ -0.24
VCP-201ENST00000358901 XRN1Q8IZH2 1706 aaKnown RBP13.58□□□□□ -0.24
VCP-201ENST00000358901 OR2AG2A6NM03 316 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 TOR1BO14657 336 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 OGNP20774 298 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 PTGER3P43115 390 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 YAP1P46937 504 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 GSCP56915 257 aaPredicted RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 SMARCB1Q12824 385 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 CAPN13Q6MZZ7 669 aaPredicted RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 RAVER1Q8IY67 606 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 C2orf73Q8N5S3 287 aaPredicted RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 XAGE5Q8WWM1 108 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 HAPLN3Q96S86 360 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 PKP2Q99959 881 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 SUCOQ9UBS9 1254 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 TMA7Q9Y2S6 64 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 STYXL1Q9Y6J8 313 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 BAZ2AQ9UIF9 1905 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 AQP12BA6NM10 295 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 H3BM21 787 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 GABRDO14764 452 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 NOBOXO60393 691 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 RFPL1O75677 317 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 HERVK_113P63132 956 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 PPP1R8Q12972 351 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 EMC10Q5UCC4 262 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 MBLAC2Q68D91 279 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 CTU1Q7Z7A3 348 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 P2RY8Q86VZ1 359 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 AQP12AQ8IXF9 295 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 PIWIL1Q96J94 861 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 CYP2S1Q96SQ9 504 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 ERVK-6Q9BXR3 956 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 C1orf21Q9H246 121 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 ITGB1BP2Q9UKP3 347 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 AP3D1O14617 1153 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 NIPSNAP2O75323 286 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 PRG2P13727 222 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 ELNP15502 786 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 TLX1P31314 330 aaPredicted RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 MTTPP55157 894 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 RPS24P62847 133 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 MOGSQ13724 837 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 PCLAFQ15004 111 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 HERC3Q15034 1050 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 QPRTQ15274 297 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 RBM20Q5T481 1227 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 ZDHHC21Q8IVQ6 265 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 C11orf65Q8NCR3 313 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 COX4I2Q96KJ9 171 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 NSMCE3Q96MG7 304 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 TEFMQ96QE5 360 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 NUSAP1Q9BXS6 441 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 CMTM6Q9NX76 183 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 FCF1Q9Y324 198 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 MYO9BQ13459 2157 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 A0A088AWK7 358 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 CLDN25C9JDP6 229 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 TNFRSF11BO00300 401 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 CXCR6O00574 342 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 DUSP11O75319 330 aaKnown RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 FABP3P05413 133 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 SLC35G4P0C7Q5 338 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 ZNF10P21506 573 aaPredicted RBP13.57□□□□□ -0.24
VCP-201ENST00000358901 CDH4P55283 916 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 SP3Q02447 781 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 MZT2AQ6P582 158 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 TAS1R3Q7RTX0 852 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 GPR65Q8IYL9 337 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 AHI1Q8N157 1196 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 CDK15Q96Q40 435 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 FIZ1Q96SL8 496 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 GPR22Q99680 433 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 TCF25Q9BQ70 676 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 CHCHD6Q9BRQ6 235 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 MCMBPQ9BTE3 642 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 GALPQ9UBC7 116 aa13.57□□□□□ -0.24
VCP-201ENST00000358901 ALOX5P09917 674 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 SSR2P43308 183 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 C2orf80Q0P641 193 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 RPS27LQ71UM5 84 aaKnown RBP13.56□□□□□ -0.24
VCP-201ENST00000358901 HM13Q8TCT9 377 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 SKA1Q96BD8 255 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 LRRC3Q9BY71 257 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 INTS7Q9NVH2 962 aaKnown RBP13.56□□□□□ -0.24
VCP-201ENST00000358901 NEDD8-MDP1E9PL57 170 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 NRP1O14786 923 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 GGT5P36269 586 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 CCT3P49368 545 aaKnown RBP13.56□□□□□ -0.24
VCP-201ENST00000358901 ERVK-8P63133 956 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 ELP6Q0PNE2 266 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 SFT2D3Q587I9 215 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 EPGNQ6UW88 154 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 PLD6Q8N2A8 252 aaKnown RBP13.56□□□□□ -0.24
VCP-201ENST00000358901 TCAIMQ8N3R3 496 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms