RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ADGRF2Q8IZF7 708 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 C3orf58Q8NDZ4 430 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 PJA1Q8NG27 643 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 HEXDCQ8WVB3 486 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 DNAJA4Q8WW22 397 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 OR52B2Q96RD2 323 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 KCNMB3Q9NPA1 279 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 FAM105AQ9NUU6 356 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SIRPGQ9P1W8 387 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 PREX2Q70Z35 1606 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 TYROBPO43914 113 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 PLATP00750 562 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ERBB2P04626 1255 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 HLCSP50747 726 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 RAB5BP61020 215 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 TGFB2P61812 414 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 TSPAN5P62079 268 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 CAMK2GQ13555 558 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 IQCCQ4KMZ1 466 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 FOXB2Q5VYV0 432 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 HS6ST3Q8IZP7 471 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 CCDC107Q8WV48 283 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SNRNP25Q9BV90 132 aaKnown RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SEZ6LQ9BYH1 1024 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 AAASQ9NRG9 546 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 MTMR10Q9NXD2 777 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SNX6Q9UNH7 406 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ATF5Q9Y2D1 282 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 CCNDBP1O95273 360 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 CXCL8P10145 99 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 KLF1Q13351 362 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 IDNKQ5T6J7 187 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 NDNFQ8TB73 568 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 MUC3BQ9H195 1237 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 AHSPQ9NZD4 102 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 MAT2BQ9NZL9 334 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF69Q9UC07 566 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 AASSQ9UDR5 926 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SAMD4AQ9UPU9 718 aaKnown RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 VWDEQ8N2E2 1590 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 TRBC1P01850 177 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 FPR1P21462 350 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 RYKP34925 604 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SEZ6Q53EL9 994 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 RAP1GAP2Q684P5 730 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 CLEC6AQ6EIG7 209 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF367Q7RTV3 350 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 OR5H6Q8NGV6 325 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 RNF157Q96PX1 679 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 UQCC2Q9BRT2 126 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ANKRD60Q9BZ19 345 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ANKMY1Q9P2S6 941 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SEC14L4Q9UDX3 406 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ELK4P28324 431 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 CD86P42081 329 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SLC26A9Q7LBE3 791 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ITIH5Q86UX2 942 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 TRIM48Q8IWZ4 208 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 DCP1BQ8IZD4 617 aaKnown RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 VANGL1Q8TAA9 524 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 TCF25Q9BQ70 676 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ERVK-18Q9QC07 812 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 IFT52Q9Y366 437 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ZFHX2Q9C0A1 2572 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ELOVL7A1L3X0 281 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 FAM159BA6NKW6 160 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SGTAO43765 313 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ARHGEF15O94989 841 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SNAP29O95721 258 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 IL2P60568 153 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 LAPTM5Q13571 262 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SPOUT1Q5T280 376 aaKnown RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 NOXA1Q86UR1 476 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 OR4A15Q8NGL6 344 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ZFP90Q8TF47 636 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 TEFMQ96QE5 360 aaKnown RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 CCDC106Q9BWC9 280 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 NTN4Q9HB63 628 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 POPDC2Q9HBU9 364 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 CCM2LQ9NUG4 571 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 TP73O15350 636 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 IFNW1P05000 195 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 CD40LGP29965 261 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 CASP3P42574 277 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 BAATQ14032 418 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 LRP8Q14114 963 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 PLD5Q8N7P1 536 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 FAM84AQ96KN4 292 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF350Q9GZX5 532 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 RBM22Q9NW64 420 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 DEPDC5O75140 1603 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 FPGTO14772 594 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 OR5F1O95221 314 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ATE1O95260 518 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 GNPDA1P46926 289 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF135P52742 658 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 SLC25A24Q6NUK1 477 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 TMEM17Q86X19 198 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms