RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RAB2BQ8WUD1 216 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 EEF1AKMT1Q8WVE0 214 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MAELQ96JY0 434 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 OR52E6Q96RD3 313 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 IL12RB2Q99665 862 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 LRRC3Q9BY71 257 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MARCH7Q9H992 704 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ATP13A1Q9HD20 1204 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 SMPD4Q9NXE4 827 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 FKBPLQ9UIM3 349 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MAGEL2Q9UJ55 1249 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 C3orf18Q9UK00 162 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 PTBP2Q9UKA9 531 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF510Q9Y2H8 683 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 PCDHB3Q9Y5E6 796 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 LY75O60449 1722 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 FZD9O00144 591 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 NDUFS2O75306 463 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 INMTO95050 263 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MLYCDO95822 493 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MAP2K4P45985 399 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 PGFP49763 221 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 HTR6P50406 440 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 SCAPQ12770 1279 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 DGUOKQ16854 277 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 AAK1Q2M2I8 961 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 IQSEC1Q6DN90 963 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ANKRD26P1Q6NSI1 321 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 SPATA19Q7Z5L4 167 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 PROSER1Q86XN7 944 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 NLGN2Q8NFZ4 835 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 OR13J1Q8NGT2 312 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 UTP15Q8TED0 518 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TMEM125Q96AQ2 219 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CDKN2AIPNLQ96HQ2 116 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 FUNDC2Q9BWH2 189 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TM6SF2Q9BZW4 377 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 REXO4Q9GZR2 422 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MFSD1Q9H3U5 465 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF385DQ9H6B1 395 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 IPPKQ9H8X2 491 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 WDR70Q9NW82 654 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 GMPPBQ9Y5P6 360 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CORINQ9Y5Q5 1042 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 SNX8Q9Y5X2 465 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 LTBP1Q14766 1721 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 EVPLLA8MZ36 301 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 H0YJX3 145 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 BCKDKO14874 412 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 NBNO60934 754 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CNOT3O75175 753 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 RECQL5O94762 991 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ABCB1P08183 1280 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 RAP2AP10114 183 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 UROSP10746 265 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 KCNE1P15382 129 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 PORP16435 677 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 IDH2P48735 452 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ST13P50502 369 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TRIM32Q13049 653 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 SELPLGQ14242 412 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 PTPRRQ15256 657 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MAPRE1Q15691 268 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CRY1Q16526 586 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 PDCD4Q53EL6 469 aaKnown RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CYBRD1Q53TN4 286 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 LCN8Q6JVE9 175 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF621Q6ZSS3 439 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 AHSA2Q719I0 299 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 GALNT10Q86SR1 603 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 IGFN1Q86VF2 1251 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 LRRTM3Q86VH5 581 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 RASAL3Q86YV0 1011 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 HID1Q8IV36 788 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 ADHFE1Q8IWW8 467 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MINDY1Q8N5J2 469 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 FRS2Q8WU20 508 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CGREF1Q99674 301 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 CLPBQ9H078 707 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TREX1Q9NSU2 369 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 TUBA8Q9NY65 449 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-203ENST00000358528 MTRRQ9UBK8 725 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 VPS51Q9UID3 782 aa6.5□□□□□ -1.37
CSDE1-203ENST00000358528 DNAJC25-GNG10A0A024R161 153 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 MFN2O95140 757 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 PKMP14618 531 aaKnown RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 POU1F1P28069 291 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 S100A5P33763 92 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 CPT1AP50416 773 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 HLCSP50747 726 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 PLA2G16P53816 162 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 MLLT6P55198 1093 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 CASP9P55211 416 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ERVK-8P63133 956 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 CD300CQ08708 224 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 CTXN3Q4LDR2 81 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 C6orf136Q5SQH8 315 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 PM20D1Q6GTS8 502 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 SULT1C3Q6IMI6 304 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 FBXL22Q6P050 247 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms