RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 C9J4A7 227 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 TRIM24O15164 1050 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 KYNUQ16719 465 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 AMZ1Q400G9 498 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 NXNQ6DKJ4 435 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 ZNF572Q7Z3I7 529 aaPredicted RBP9.06□□□□□ -0.96
UPF2-202ENST00000357604 DCUN1D3Q8IWE4 304 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 RDH11Q8TC12 318 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 LINGO1Q96FE5 620 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 C17orf62Q9BQA9 187 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 USP36Q9P275 1121 aaKnown RBP9.06□□□□□ -0.96
UPF2-202ENST00000357604 VWA7Q9Y334 891 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 AK5Q9Y6K8 562 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 LOC285095A0A1B0GVY8 99 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 GFRA3O60609 400 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 FGL2Q14314 439 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 HECTD2Q5U5R9 776 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 SEL1L3Q68CR1 1132 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 CES3Q6UWW8 571 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 CCNI2Q6ZMN8 369 aaPredicted RBP9.06□□□□□ -0.96
UPF2-202ENST00000357604 FBXO39Q8N4B4 442 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 AIF1LQ9BQI0 150 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 OPTCQ9UBM4 332 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 EPHA6Q9UF33 1036 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 INTS6Q9UL03 887 aaKnown RBP9.06□□□□□ -0.96
UPF2-202ENST00000357604 WDR81Q562E7 1941 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 ALPK3Q96L96 1907 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 EIF3FO00303 357 aaPredicted RBP9.06□□□□□ -0.96
UPF2-202ENST00000357604 AVILO75366 819 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 METTL18O95568 372 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 C1SP09871 688 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 COL6A2P12110 1019 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 ALDH4A1P30038 563 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 CSNK1EP49674 416 aaKnown RBP9.06□□□□□ -0.96
UPF2-202ENST00000357604 PLK5Q496M5 336 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 ALG1LQ6GMV1 187 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 ACMSDQ8TDX5 336 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 RTKNQ9BST9 563 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 CDC42EP4Q9H3Q1 356 aaKnown RBP9.06□□□□□ -0.96
UPF2-202ENST00000357604 NINJ2Q9NZG7 142 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.06□□□□□ -0.96
UPF2-202ENST00000357604 TMEM247A6NEH6 219 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 TRIM49D1C9J1S8 452 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 VILLO15195 856 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 PCNAP12004 261 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 NMBRP28336 390 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 HNMTP50135 292 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 IRX4P78413 519 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 SLC14A1Q13336 389 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 SETDB1Q15047 1291 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 MROH9Q5TGP6 573 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 UNC5AQ6ZN44 842 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 HSD11B1LQ7Z5J1 315 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 OR13C4Q8NGS5 318 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 FRS2Q8WU20 508 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 LRFN3Q9BTN0 628 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 SLC6A17Q9H1V8 727 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 CHRAC1Q9NRG0 131 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 ADGRE2Q9UHX3 823 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 SUFUQ9UMX1 484 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 CSNK1G3Q9Y6M4 447 aa9.06□□□□□ -0.96
UPF2-202ENST00000357604 ANKDD1BA6NHY2 528 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 BPIP17213 487 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 COL9A1P20849 921 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 ITPKAP23677 461 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 PTGIRP43119 386 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 SLCO1A2P46721 670 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 ZNF683Q8IZ20 524 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 CCNYL1Q8N7R7 359 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 SPOCK2Q92563 424 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 LYSMD1Q96S90 227 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 WWP1Q9H0M0 922 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 ERVMER34-1Q9H9K5 563 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 MAPRE3Q9UPY8 281 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 ITM2BQ9Y287 266 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 CCNT2O60583 730 aaKnown RBP9.05□□□□□ -0.96
UPF2-202ENST00000357604 RFPL3O75679 317 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 IL4RP24394 825 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 CLPPQ16740 277 aaPredicted RBP9.05□□□□□ -0.96
UPF2-202ENST00000357604 CPNE8Q86YQ8 564 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 CRLF3Q8IUI8 442 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 SLC41A1Q8IVJ1 513 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 MRPS30Q9NP92 439 aaKnown RBP9.05□□□□□ -0.96
UPF2-202ENST00000357604 TM7SF3Q9NS93 570 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 SERTAD3Q9UJW9 196 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 MYH10P35580 1976 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 KRT6AP02538 564 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 KRT6BP04259 564 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 TLX1P31314 330 aaPredicted RBP9.05□□□□□ -0.96
UPF2-202ENST00000357604 KRT6CP48668 564 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 CLCNKAP51800 687 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 MRPS25P82663 173 aaKnown RBP9.05□□□□□ -0.96
UPF2-202ENST00000357604 ARRDC2Q8TBH0 407 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 ELF4Q99607 663 aaPredicted RBP9.05□□□□□ -0.96
UPF2-202ENST00000357604 C1QTNF2Q9BXJ5 285 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 ENTPD2Q9Y5L3 495 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 TSC2P49815 1807 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 TCRBV7S2A1N4TA0A589 114 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 MUSKO15146 869 aa9.05□□□□□ -0.96
UPF2-202ENST00000357604 SF1Q15637 639 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms