RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 EMILIN2Q9BXX0 1053 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 MRPL9Q9BYD2 267 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 SEZ6LQ9BYH1 1024 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 PRKD2Q9BZL6 878 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 TUBB1Q9H4B7 451 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 MROH8Q9H579 483 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ATP13A3Q9H7F0 1226 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 CATSPERBQ9H7T0 1116 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 SARS2Q9NP81 518 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 UXTQ9UBK9 157 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 RNF112Q9ULX5 631 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 ARL5AQ9Y689 179 aa8.16□□□□□ -1.1
CDC42SE1-201ENST00000357235 BBIP1A8MTZ0 92 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 EVPLLA8MZ36 301 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 FZD9O00144 591 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 PTGESO14684 152 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 SYNCRIPO60506 623 aaKnown RBP8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 XYLBO75191 536 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 B3GAT3O94766 335 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 CTSHP09668 335 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 NAGAP17050 411 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 ALDH4A1P30038 563 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 PGFP49763 221 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 VAC14Q08AM6 782 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 C19orf57Q0VDD7 668 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 LAPTM5Q13571 262 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 GALNT3Q14435 633 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 SNAP47Q5SQN1 464 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 SDHAF4Q5VUM1 108 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 AGMOQ6ZNB7 445 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 PIWIL3Q7Z3Z3 882 aaKnown RBP8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 HS3ST5Q8IZT8 346 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 FNDC5Q8NAU1 212 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 C3orf58Q8NDZ4 430 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 LILRB1Q8NHL6 650 aaPredicted RBP8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 FBXO30Q8TB52 745 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 HTRA1Q92743 480 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 DPF3Q92784 378 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 OMA1Q96E52 524 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 SMARCD1Q96GM5 515 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 UBXN10Q96LJ8 280 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 CDK15Q96Q40 435 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 SLC30A3Q99726 388 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 BDH2Q9BUT1 245 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 GPN2Q9H9Y4 310 aaPredicted RBP8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 SP110Q9HB58 689 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 DDX28Q9NUL7 540 aaKnown RBP8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 GMIPQ9P107 970 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 CAB39Q9Y376 341 aaPredicted RBP8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 U3KQV3 271 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 SSC5DA1L4H1 1573 aa8.15□□□□□ -1.1
CDC42SE1-201ENST00000357235 CCNKO75909 580 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 DDNO94850 711 aaPredicted RBP8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 HMBSP08397 361 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLC2A3P11169 496 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 LEPRP48357 1165 aaKnown RBP8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 POLD2P49005 469 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 AGTR2P50052 363 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 GALNT1Q10472 559 aaPredicted RBP8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 CCNYL2Q5T2Q4 361 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 MARC1Q5VT66 337 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 SMYD5Q6GMV2 418 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 PRMT9Q6P2P2 845 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 COLGALT2Q8IYK4 626 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 DCP1BQ8IZD4 617 aaKnown RBP8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 SPARTQ8N0X7 666 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 FBXO39Q8N4B4 442 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 PACRGLQ8N7B6 248 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR13F1Q8NGS4 319 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR13C4Q8NGS5 318 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 SDCCAG3Q96C92 435 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 BIRC7Q96CA5 298 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 MAP6Q96JE9 813 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 NSMCE2Q96MF7 247 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 CLSTN3Q9BQT9 956 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 TRMOQ9BU70 441 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 UBA2Q9UBT2 640 aaPredicted RBP8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 UGT2A1Q9Y4X1 527 aa8.15□□□□□ -1.11
CDC42SE1-201ENST00000357235 TRIM64A6NGJ6 449 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 POLR1CO15160 346 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 RHOBTB1O94844 696 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 GLP2RO95838 553 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 S1PR4O95977 384 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 POMCP01189 267 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 CYBBP04839 570 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPIP06744 558 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 FCGR1AP12314 374 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 FMO4P31512 558 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 ADRA1AP35348 466 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 GRIK1P39086 918 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 BRCC3P46736 316 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR4D2P58180 307 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 TRIM32Q13049 653 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 TSNQ15631 228 aaKnown RBP8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 PM20D1Q6GTS8 502 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 GLYATQ6IB77 296 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 LCN8Q6JVE9 175 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 IDO2Q6ZQW0 420 aa8.14□□□□□ -1.11
CDC42SE1-201ENST00000357235 R3HCC1LQ7Z5L2 792 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms