RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 EI24O14681 340 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 RSL1D1O76021 490 aaKnown RBP13.63□□□□□ -0.23
EBF3-201ENST00000355311 SLC6A2P23975 617 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 BMXP51813 675 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 DNAJB13P59910 316 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 HTRA3P83110 453 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 IL1RL1Q01638 556 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 IL10RBQ08334 325 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 SF1Q15637 639 aaKnown RBP13.63□□□□□ -0.23
EBF3-201ENST00000355311 NEDD8Q15843 81 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 AARS2Q5JTZ9 985 aaKnown RBP13.63□□□□□ -0.23
EBF3-201ENST00000355311 ANKS6Q68DC2 871 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 TXNDC8Q6A555 127 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 TBPL2Q6SJ96 375 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 LYSMD3Q7Z3D4 306 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 GPR141Q7Z602 305 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 GALNT10Q86SR1 603 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 ANKRD46Q86W74 232 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 SLC22A9Q8IVM8 553 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 ADCY4Q8NFM4 1077 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 CDC26Q8NHZ8 85 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 PYCR2Q96C36 320 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 LRRC58Q96CX6 371 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 EGFL8Q99944 293 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 C17orf80Q9BSJ5 609 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 SLC38A8A6NNN8 435 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 HTRA2O43464 458 aaPredicted RBP13.63□□□□□ -0.23
EBF3-201ENST00000355311 CAPN1P07384 714 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 OR4D2P58180 307 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 LETMD1Q6P1Q0 360 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 KIAA0408Q6ZU52 694 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 GPR180Q86V85 440 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 FBXO22Q8NEZ5 403 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 LKAAEAR1Q8TD35 194 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 C1orf74Q96LT6 269 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 ARNT2Q9HBZ2 717 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 SMOXQ9NWM0 555 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 MARCH5Q9NX47 278 aa13.63□□□□□ -0.23
EBF3-201ENST00000355311 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.62□□□□□ -0.23
EBF3-201ENST00000355311 C1orf232A0A0U1RR37 186 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 DHRS12A0PJE2 317 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 ACSL4O60488 711 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 CAPN15O75808 1086 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 LRATO95237 230 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 G6PDP11413 515 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 LBPP18428 481 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 ALDH3B2P48448 385 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 LIPEQ05469 1076 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 RAD51Q06609 339 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 DSC1Q08554 894 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 ZNF177Q13360 481 aaPredicted RBP13.62□□□□□ -0.23
EBF3-201ENST00000355311 PMS2P3Q13401 168 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 NR6A1Q15406 480 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 PERM1Q5SV97 790 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 BORAQ6PGQ7 559 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 DDHD1Q8NEL9 900 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 FBXO30Q8TB52 745 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 STAG3L4Q8TBR4 150 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 TANKQ92844 425 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 BIRC8Q96P09 236 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 HAUS8Q9BT25 410 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 UPF3AQ9H1J1 476 aaKnown RBP13.62□□□□□ -0.23
EBF3-201ENST00000355311 PCDH12Q9NPG4 1184 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 CD84Q9UIB8 345 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 TRMT6Q9UJA5 497 aaKnown RBP13.62□□□□□ -0.23
EBF3-201ENST00000355311 Q9Y3F1 56 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 PIKFYVEQ9Y2I7 2098 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 ASPDHA6ND91 283 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 FXYD1O00168 92 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 ARPC2O15144 300 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 TBL1XO60907 577 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 SNAP29O95721 258 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 NDST3O95803 873 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 TYMPP19971 482 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 PRKACGP22612 351 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 NEK2P51955 445 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 ERVPABLB-1P60509 514 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 ZXDBP98169 803 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 GTDC1Q4AE62 458 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 RFTN2Q52LD8 501 aaPredicted RBP13.62□□□□□ -0.23
EBF3-201ENST00000355311 FRA10AC1Q70Z53 315 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 ARMCX6Q7L4S7 300 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 GPSM1Q86YR5 675 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 EPHX4Q8IUS5 362 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 PHACTR4Q8IZ21 702 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 SLC15A4Q8N697 577 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 FAM86B1Q8N7N1 296 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 ARL14EPQ8N8R7 260 aaPredicted RBP13.62□□□□□ -0.23
EBF3-201ENST00000355311 CIPCQ9C0C6 399 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 TMEM181Q9P2C4 612 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 CD300AQ9UGN4 299 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 PRSS21Q9Y6M0 314 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 DOCK4Q8N1I0 1966 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 C2orf81A6NN90 581 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 CBFA2T3O75081 653 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 CYBBP04839 570 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 EEF1B2P24534 225 aaKnown RBP13.62□□□□□ -0.23
EBF3-201ENST00000355311 CASP9P55211 416 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 FKBP1BP68106 108 aa13.62□□□□□ -0.23
EBF3-201ENST00000355311 TRIM71Q2Q1W2 868 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms