RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 KCTD3Q9Y597 815 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 HSPE1-MOB4S4R3N1 261 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 ZFC3H1O60293 1989 aaKnown RBP11.28□□□□□ -0.6
CAPN9-202ENST00000354537 J3KR12 359 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 TNFRSF10BO14763 440 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 AQP9O43315 295 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 MSH3P20585 1137 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 ACVR2AP27037 513 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 CXCR4P61073 352 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 YWHAHQ04917 246 aaPredicted RBP11.28□□□□□ -0.6
CAPN9-202ENST00000354537 CD47Q08722 323 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 UPP1Q16831 310 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 DGUOKQ16854 277 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 TIGD5Q53EQ6 642 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 SETMARQ53H47 684 aaPredicted RBP11.28□□□□□ -0.6
CAPN9-202ENST00000354537 ZNF691Q5VV52 312 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 FAM219BQ5XKK7 198 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 SLC2A7Q6PXP3 512 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 PAQR3Q6TCH7 311 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 RNF165Q6ZSG1 346 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 SCD5Q86SK9 330 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 SPNS2Q8IVW8 549 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 ADHFE1Q8IWW8 467 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 OR2T11Q8NH01 316 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 DNAJB8Q8NHS0 232 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 TBC1D20Q96BZ9 403 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 TINF2Q9BSI4 451 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 AMBRA1Q9C0C7 1298 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 TRIT1Q9H3H1 467 aaKnown RBP11.28□□□□□ -0.6
CAPN9-202ENST00000354537 NLE1Q9NVX2 485 aaPredicted RBP11.28□□□□□ -0.6
CAPN9-202ENST00000354537 KIAA1522Q9P206 1035 aaPredicted RBP11.28□□□□□ -0.6
CAPN9-202ENST00000354537 MTRRQ9UBK8 725 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 ZNF225Q9UK10 706 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 SLC45A1Q9Y2W3 748 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 ST14Q9Y5Y6 855 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 ANKRD36A6QL64 1941 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 A0A1B0GTL3 188 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 SLC1A7O00341 560 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 KPNA6O60684 536 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 JRKO75564 520 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 KCNH1O95259 989 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 ITGAMP11215 1152 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 HPCAL1P37235 193 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 EIF2B2P49770 351 aaKnown RBP11.28□□□□□ -0.6
CAPN9-202ENST00000354537 PSEN2P49810 448 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 MAXP61244 160 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 DPY19L1Q2PZI1 675 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 PARP15Q460N3 678 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 PIK3R6Q5UE93 754 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 Q6ZSR9 355 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 FNDC5Q8NAU1 212 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 C3orf58Q8NDZ4 430 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 PHF10Q8WUB8 498 aaKnown RBP11.28□□□□□ -0.6
CAPN9-202ENST00000354537 CDKN2AIPNLQ96HQ2 116 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 POLR1EQ9GZS1 481 aaKnown RBP11.28□□□□□ -0.6
CAPN9-202ENST00000354537 MED16Q9Y2X0 877 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 PLXNB2O15031 1838 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
CAPN9-202ENST00000354537 MIA3Q5JRA6 1907 aa11.27□□□□□ -0.6
CAPN9-202ENST00000354537 LOC100130705A0A1B0GUX0 176 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 M0QZQ0 153 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 PFDN6O15212 129 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 CNTN5O94779 1100 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 NDST3O95803 873 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 MT-ND1P03886 318 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 TGM1P22735 817 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 CASP2P42575 452 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 RXRGP48443 463 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 RAD23AP54725 363 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 GP2P55259 537 aaKnown RBP11.27□□□□□ -0.61
CAPN9-202ENST00000354537 YBEYP58557 167 aaPredicted RBP11.27□□□□□ -0.61
CAPN9-202ENST00000354537 ECT2LQ008S8 904 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 POLD3Q15054 466 aaPredicted RBP11.27□□□□□ -0.61
CAPN9-202ENST00000354537 TSNQ15631 228 aaKnown RBP11.27□□□□□ -0.61
CAPN9-202ENST00000354537 RBBP7Q16576 425 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 MEP1AQ16819 746 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 C1QTNF12Q5T7M4 302 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 ALG1LQ6GMV1 187 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 LAIR2Q6ISS4 152 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 AFTPHQ6ULP2 937 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 PRSS48Q7RTY5 328 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 HIPK1Q86Z02 1210 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 LACC1Q8IV20 430 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 THEM5Q8N1Q8 247 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 ZNF513Q8N8E2 541 aaPredicted RBP11.27□□□□□ -0.61
CAPN9-202ENST00000354537 SETD9Q8NE22 299 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 OR7A2PQ8NGA2 310 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 SCAMP5Q8TAC9 235 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 RPL10LQ96L21 214 aaKnown RBP11.27□□□□□ -0.61
CAPN9-202ENST00000354537 KLHL5Q96PQ7 755 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 RMND5AQ9H871 391 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 ADARB2Q9NS39 739 aaKnown RBP11.27□□□□□ -0.61
CAPN9-202ENST00000354537 USP22Q9UPT9 525 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 ERVW-1Q9UQF0 538 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 COMMD10Q9Y6G5 202 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 DRGXA6NNA5 263 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 ADM5C9JUS6 153 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 CCL22O00626 93 aa11.27□□□□□ -0.61
CAPN9-202ENST00000354537 ANKRD28O15084 1053 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms