RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 BUD23O43709 281 aaKnown RBP16.53■□□□□ 0.24
SMN1-201ENST00000351205 KIAA0754O94854 1291 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 NDUFA10O95299 355 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 PTMSP20962 102 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 DLSTP36957 453 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 HALP42357 657 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 MARCKSL1P49006 195 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 DMPKQ09013 629 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 IL11RAQ14626 422 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 SLC1A5Q15758 541 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 PPP2R5EQ16537 467 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 TFDP3Q5H9I0 405 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 LDLRAP1Q5SW96 308 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 ZDHHC20Q5W0Z9 365 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 FAM83HQ6ZRV2 1179 aaPredicted RBP16.53■□□□□ 0.24
SMN1-201ENST00000351205 AMZ2Q86W34 360 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 RASGRP3Q8IV61 690 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 CNGA4Q8IV77 575 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 DDHD1Q8NEL9 900 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 APOBEC4Q8WW27 367 aaKnown RBP16.53■□□□□ 0.24
SMN1-201ENST00000351205 KLHL6Q8WZ60 621 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 STAMBPL1Q96FJ0 436 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 QKIQ96PU8 341 aaKnown RBP eCLIP16.53■□□□□ 0.24
SMN1-201ENST00000351205 ZCCHC2Q9C0B9 1178 aaKnown RBP16.53■□□□□ 0.24
SMN1-201ENST00000351205 HACD3Q9P035 362 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 EPHA6Q9UF33 1036 aa16.53■□□□□ 0.24
SMN1-201ENST00000351205 NAV2Q8IVL1 2488 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 GLYATL1P3A0A0U1RQE8 302 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 OR2AG2A6NM03 316 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 GAPDHSO14556 408 aaPredicted RBP16.52■□□□□ 0.24
SMN1-201ENST00000351205 KCNJ13O60928 360 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 POP7O75817 140 aaKnown RBP16.52■□□□□ 0.24
SMN1-201ENST00000351205 FGF5P12034 268 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 HLA-DPA1P20036 260 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 HADHBP55084 474 aaKnown RBP16.52■□□□□ 0.24
SMN1-201ENST00000351205 MPP3Q13368 585 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 RPE65Q16518 533 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 GPRC6AQ5T6X5 926 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 PID1Q7Z2X4 250 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 KATNAL2Q8IYT4 538 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 COL26A1Q96A83 441 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 ABHD17AQ96GS6 310 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 VAT1Q99536 393 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 RAB33BQ9H082 229 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMN1-201ENST00000351205 LNPEPQ9UIQ6 1025 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 PSMD13Q9UNM6 376 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 PKP3Q9Y446 797 aa16.52■□□□□ 0.24
SMN1-201ENST00000351205 DOPEY2Q9Y3R5 2298 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 IGHV5-51A0A0C4DH38 117 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 GOLGA6L3A6NEY3 463 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 AKR1B15C9JRZ8 316 aaPredicted RBP16.51■□□□□ 0.23
SMN1-201ENST00000351205 SPAG6O75602 509 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 ZRANB2O95218 330 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMN1-201ENST00000351205 NELFEP18615 380 aaKnown RBP16.51■□□□□ 0.23
SMN1-201ENST00000351205 FECHP22830 423 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 TBX2Q13207 712 aaPredicted RBP16.51■□□□□ 0.23
SMN1-201ENST00000351205 ITGA9Q13797 1035 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 NFE2L1Q14494 772 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 PTPRCAPQ14761 206 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 TMEM220Q6QAJ8 160 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 PPP1R3BQ86XI6 285 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 CCDC50Q8IVM0 306 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 RSPH14Q9UHP6 348 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 KCTD3Q9Y597 815 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 PCDHB3Q9Y5E6 796 aa16.51■□□□□ 0.23
SMN1-201ENST00000351205 HACD1B0YJ81 288 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 TIAF1O95411 115 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 FURINP09958 794 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 PBLDP30039 288 aaPredicted RBP16.5■□□□□ 0.23
SMN1-201ENST00000351205 CASRP41180 1078 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 MAGEA1P43355 309 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 SEPT6Q14141 434 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 ERV3-1Q14264 604 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMN1-201ENST00000351205 RCOR2Q8IZ40 523 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 BEND7Q8N7W2 519 aaPredicted RBP16.5■□□□□ 0.23
SMN1-201ENST00000351205 FSD1LQ9BXM9 530 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 TSPY26PQ9H489 355 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 C10orf88Q9H8K7 445 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 SMOXQ9NWM0 555 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 SEMA5BQ9P283 1151 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 ANAPC2Q9UJX6 822 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 TRHDEQ9UKU6 1024 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 TFR2Q9UP52 801 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 KCNMB2Q9Y691 235 aa16.5■□□□□ 0.23
SMN1-201ENST00000351205 CFAP20Q9Y6A4 193 aaKnown RBP16.5■□□□□ 0.23
SMN1-201ENST00000351205 DNMT3AQ9Y6K1 912 aaPredicted RBP16.5■□□□□ 0.23
SMN1-201ENST00000351205 STX7O15400 261 aaKnown RBP16.49■□□□□ 0.23
SMN1-201ENST00000351205 KATNA1O75449 491 aa16.49■□□□□ 0.23
SMN1-201ENST00000351205 PRAMEF1O95521 474 aa16.49■□□□□ 0.23
SMN1-201ENST00000351205 AGTP01019 485 aa16.49■□□□□ 0.23
SMN1-201ENST00000351205 CCNYL3P0C7X3 344 aa16.49■□□□□ 0.23
SMN1-201ENST00000351205 AKT1P31749 480 aa16.49■□□□□ 0.23
SMN1-201ENST00000351205 TUBB3Q13509 450 aa16.49■□□□□ 0.23
SMN1-201ENST00000351205 KCNAB1Q14722 419 aa16.49■□□□□ 0.23
SMN1-201ENST00000351205 PLCL1Q15111 1095 aa16.49■□□□□ 0.23
SMN1-201ENST00000351205 LACTB2Q53H82 288 aaPredicted RBP16.49■□□□□ 0.23
SMN1-201ENST00000351205 FNBP1LQ5T0N5 605 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms