RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 NSUN3Q9H649 340 aaKnown RBP8.56□□□□□ -1.04
SKAP2-201ENST00000345317 SH3GLB1Q9Y371 365 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 LRRC42Q9Y546 428 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 LSM1O15116 133 aaKnown RBP8.56□□□□□ -1.04
SKAP2-201ENST00000345317 MYO1DO94832 1006 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 PGLSO95336 258 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 TGDSO95455 350 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 CAPN1P07384 714 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 ACADMP11310 421 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 LBPP18428 481 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 CYP2A7P20853 494 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 PTGER3P43115 390 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 ATP6V0D1P61421 351 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 SULT2A1Q06520 285 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 MSLNQ13421 630 aaPredicted RBP8.56□□□□□ -1.04
SKAP2-201ENST00000345317 C18orf21Q32NC0 220 aaPredicted RBP8.56□□□□□ -1.04
SKAP2-201ENST00000345317 KHDC1Q4VXA5 237 aaKnown RBP8.56□□□□□ -1.04
SKAP2-201ENST00000345317 ADAMTSL2Q86TH1 951 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 ZBTB2Q8N680 514 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 RDH11Q8TC12 318 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 INPP5DQ92835 1189 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 C19orf60Q96EN9 201 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 CNDP1Q96KN2 507 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 TRIM8Q9BZR9 551 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 NDUFAF1Q9Y375 327 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 RGSL1A5PLK6 1076 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 CARNS1A5YM72 827 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 MMP20O60882 483 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 ULK1O75385 1050 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 OAS1P00973 400 aaKnown RBP8.56□□□□□ -1.04
SKAP2-201ENST00000345317 CXCL10P02778 98 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 PCCBP05166 539 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 MAGEA3P43357 314 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 SLC18A1P54219 525 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 C1QTNF8P60827 252 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 SLC34A1Q06495 639 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 KCTD21Q4G0X4 260 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 TCEAL5Q5H9L2 206 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 KRT80Q6KB66 452 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 TMEM220Q6QAJ8 160 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 SCML4Q8N228 414 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 OR14C36Q8NHC7 312 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 TSSK3Q96PN8 268 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 SH3BP4Q9P0V3 963 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 FNIP2Q9P278 1114 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 EIF3LQ9Y262 564 aaKnown RBP8.56□□□□□ -1.04
SKAP2-201ENST00000345317 ASF1AQ9Y294 204 aa8.56□□□□□ -1.04
SKAP2-201ENST00000345317 DYTNA2CJ06 578 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 SRCP12931 536 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 ATP6V1B1P15313 513 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 HOXB8P17481 243 aaPredicted RBP8.55□□□□□ -1.04
SKAP2-201ENST00000345317 CCR2P41597 374 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 PRKAA2P54646 552 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 HMGCS1Q01581 520 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 DLG1Q12959 904 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 SEMA3AQ14563 771 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 LIN52Q52LA3 116 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 DGKKQ5KSL6 1271 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 MANEALQ5VSG8 457 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 FBXO27Q8NI29 283 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 MZB1Q8WU39 189 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 MGME1Q9BQP7 344 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 DPY30Q9C005 99 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 OR2AG1Q9H205 316 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 LRMDAQ9H2I8 198 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 EURLQ9NYK6 297 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 CROTQ9UKG9 612 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 LZTS1Q9Y250 596 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 SCN10AQ9Y5Y9 1956 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 H3BMM5 538 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 EPOP01588 193 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 ESR1P03372 595 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 NTRK1P04629 796 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 ATXN1LP0C7T5 689 aaKnown RBP8.55□□□□□ -1.04
SKAP2-201ENST00000345317 ZNF37AP17032 561 aaPredicted RBP8.55□□□□□ -1.04
SKAP2-201ENST00000345317 OGNP20774 298 aaKnown RBP8.55□□□□□ -1.04
SKAP2-201ENST00000345317 PREPP48147 710 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 NAE1Q13564 534 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 DHCR24Q15392 516 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 TNFAIP8L3Q5GJ75 292 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 TMEM240Q5SV17 173 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 C9orf50Q5SZB4 431 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 CXorf57Q6NSI4 855 aaKnown RBP8.55□□□□□ -1.04
SKAP2-201ENST00000345317 FRMD7Q6ZUT3 714 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 BHLHE22Q8NFJ8 381 aaPredicted RBP8.55□□□□□ -1.04
SKAP2-201ENST00000345317 VPS33AQ96AX1 596 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 SLC45A3Q96JT2 553 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 ZSWIM3Q96MP5 696 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 TTLL2Q9BWV7 592 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 COPS7BQ9H9Q2 264 aaPredicted RBP8.55□□□□□ -1.04
SKAP2-201ENST00000345317 NLE1Q9NVX2 485 aaPredicted RBP8.55□□□□□ -1.04
SKAP2-201ENST00000345317 UBAP1Q9NZ09 502 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 THEGQ9P2T0 379 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 ZNF646O15015 1829 aaPredicted RBP8.55□□□□□ -1.04
SKAP2-201ENST00000345317 LINC01553A4QN01 128 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 NPIPB15A6NHN6 443 aaPredicted RBP8.55□□□□□ -1.04
SKAP2-201ENST00000345317 TULP3O75386 442 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 VNN2O95498 520 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 KRT6AP02538 564 aa8.55□□□□□ -1.04
SKAP2-201ENST00000345317 MT-ND1P03886 318 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms