RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 MSS51Q4VC12 460 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 PSAPL1Q6NUJ1 521 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 SLC30A9Q6PML9 568 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 PACS1Q6VY07 963 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 DET1Q7L5Y6 550 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 KANSL1Q7Z3B3 1105 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 PIP4P1Q86T03 277 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 CCDC25Q86WR0 208 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 FAM181AQ8N9Y4 354 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 AVL9Q8NBF6 648 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 FBXO36Q8NEA4 188 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 CFAP36Q96G28 342 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 OSGEPL1Q9H4B0 414 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 SAYSD1Q9NPB0 183 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 KLC4Q9NSK0 619 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 DMGDHQ9UI17 866 aaKnown RBP11.66□□□□□ -0.54
SNCA-202ENST00000345009 PCOLCE2Q9UKZ9 415 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 PNMA8BQ9ULN7 279 aaPredicted RBP11.66□□□□□ -0.54
SNCA-202ENST00000345009 CHMP2BQ9UQN3 213 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 PRKAB1Q9Y478 270 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 BPTFQ12830 3046 aa11.66□□□□□ -0.54
SNCA-202ENST00000345009 ZCWPW2A0A1B0GU75 182 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 C17orf113A0A1B0GUU1 675 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 ESYT3A0FGR9 886 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 MGAT4DA6NG13 374 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 OR5K4A6NMS3 321 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 H3BMM5 538 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 PRMT5O14744 637 aaPredicted RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 TP73O15350 636 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 TNFSF14O43557 240 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 SIGLEC6O43699 453 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 SPAG6O75602 509 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 GSTA2P09210 222 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 CDK4P11802 303 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 CKMT2P17540 419 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 GUCA2AQ02747 115 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 PLOD1Q02809 727 aaPredicted RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 ILF2Q12905 390 aaKnown RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 FRG1Q14331 258 aaKnown RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 NR0B2Q15466 257 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 TCEA2Q15560 299 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 KHDC1Q4VXA5 237 aaKnown RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 HP1BP3Q5SSJ5 553 aaPredicted RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 ZNF470Q6ECI4 717 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 PTRHD1Q6GMV3 140 aaKnown RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 KCNMB4Q86W47 210 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 ANKMY2Q8IV38 441 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 ARL10Q8N8L6 244 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 OR2L2Q8NH16 312 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 CNDP2Q96KP4 475 aaKnown RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 LINC00615Q96LM1 132 aaPredicted RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 FCRL3Q96P31 734 aaPredicted RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 CCM2Q9BSQ5 444 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 CCDC68Q9H2F9 335 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 STN1Q9H668 368 aaKnown RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 INTS10Q9NVR2 710 aaKnown RBP11.65□□□□□ -0.54
SNCA-202ENST00000345009 DLL3Q9NYJ7 618 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 TAAR2Q9P1P5 351 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 GULP1Q9UBP9 304 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 GNPTGQ9UJJ9 305 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 ACSL5Q9ULC5 683 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 DNAJC16Q9Y2G8 782 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 PCDHB1Q9Y5F3 818 aa11.65□□□□□ -0.54
SNCA-202ENST00000345009 TMEM131Q92545 1883 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 PDZK1P1A8MUH7 402 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 TRIM38O00635 465 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 TM4SF5O14894 197 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 KPNA5O15131 536 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 SNX2O60749 519 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 SLU7O95391 586 aaKnown RBP11.64□□□□□ -0.55
SNCA-202ENST00000345009 ESR1P03372 595 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 RHOXF2BP0C7M4 288 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 AK4P27144 223 aaPredicted RBP11.64□□□□□ -0.55
SNCA-202ENST00000345009 ARNTP27540 789 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 HALP42357 657 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 MAGEA4P43358 317 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 PRLHRP49683 370 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 NOVA1P51513 510 aaKnown RBP11.64□□□□□ -0.55
SNCA-202ENST00000345009 ADARP55265 1226 aaKnown RBP11.64□□□□□ -0.55
SNCA-202ENST00000345009 B4GALNT1Q00973 533 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 ILKQ13418 452 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 HSP90AA5PQ58FG0 334 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 TEX35Q5T0J7 233 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 STEAP4Q687X5 459 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 KCTD16Q68DU8 428 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 WASH2PQ6VEQ5 465 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 UNC5AQ6ZN44 842 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 KIAA0408Q6ZU52 694 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 CILP2Q8IUL8 1156 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 ZNF547Q8IVP9 402 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 AGGF1Q8N302 714 aaeCLIP11.64□□□□□ -0.55
SNCA-202ENST00000345009 CLDN19Q8N6F1 224 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 DEFB124Q8NES8 71 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 CCL4L1Q8NHW4 92 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 GSDMBQ8TAX9 411 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 ZDHHC1Q8WTX9 485 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 CDKL2Q92772 493 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 NAT6Q93015 286 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 CERS2Q96G23 380 aa11.64□□□□□ -0.55
SNCA-202ENST00000345009 APOLD1Q96LR9 279 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms