RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ERVK-10P10266 1014 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 BPIP17213 487 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 LPOP22079 712 aaPredicted RBP13.62□□□□□ -0.23
TPM4-202ENST00000344824 PPM1FP49593 454 aaPredicted RBP13.62□□□□□ -0.23
TPM4-202ENST00000344824 ZNF140P52738 457 aaPredicted RBP13.62□□□□□ -0.23
TPM4-202ENST00000344824 CTBSQ01459 385 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 IFFO1Q0D2I5 559 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 LAMB3Q13751 1172 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 PLA2G4EQ3MJ16 856 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 ZNF648Q5T619 568 aaPredicted RBP13.62□□□□□ -0.23
TPM4-202ENST00000344824 LVRNQ6Q4G3 990 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 CHST15Q7LFX5 561 aaPredicted RBP13.62□□□□□ -0.23
TPM4-202ENST00000344824 TMEM135Q86UB9 458 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 PHYKPLQ8IUZ5 450 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 SDR16C5Q8N3Y7 309 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 OTUD6BQ8N6M0 293 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 ZDHHC1Q8WTX9 485 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 STYXQ8WUJ0 223 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 COX14Q96I36 57 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 ZIM3Q96PE6 472 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 SRPK1Q96SB4 655 aaKnown RBP13.62□□□□□ -0.23
TPM4-202ENST00000344824 CCDC3Q9BQI4 270 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 ZSCAN5AQ9BUG6 496 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 FUT8Q9BYC5 575 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 TRABDQ9H4I3 376 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 C20orf96Q9NUD7 363 aaPredicted RBP13.62□□□□□ -0.23
TPM4-202ENST00000344824 TAAR2Q9P1P5 351 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 SLC17A6Q9P2U8 582 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 PKP3Q9Y446 797 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 ZCWPW2A0A1B0GU75 182 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 FAM221BA6H8Z2 402 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 TRABD2BA6NFA1 517 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 OR51F1A6NGY5 319 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 POC1B-GALNT4F8VUJ3 575 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 MTX2O75431 263 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 VAPBO95292 243 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 FUCA1P04066 466 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 F7P08709 466 aaPredicted RBP13.61□□□□□ -0.23
TPM4-202ENST00000344824 ABHD2P08910 425 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 GSTA2P09210 222 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 PAMP19021 973 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 STX2P32856 288 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 SPAM1P38567 509 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 ARSDP51689 593 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 MAZP56270 477 aaKnown RBP13.61□□□□□ -0.23
TPM4-202ENST00000344824 DCDC1P59894 354 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 PRAMEP78395 509 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 LONRF1Q17RB8 773 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 SKIDA1Q1XH10 827 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 CRTC3Q6UUV7 619 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 FAM151BQ6UXP7 276 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 NLRP9Q7RTR0 991 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 KCNMB4Q86W47 210 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 CTAGE3PQ8IX95 158 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 RAVER1Q8IY67 606 aaKnown RBP13.61□□□□□ -0.23
TPM4-202ENST00000344824 TRAM1L1Q8N609 369 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 Q8N9G6 341 aaPredicted RBP13.61□□□□□ -0.23
TPM4-202ENST00000344824 OR13J1Q8NGT2 312 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 OR6P1Q8NGX9 317 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 HDAC10Q969S8 669 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 CERS2Q96G23 380 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 DEPDC7Q96QD5 511 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 RUFY1Q96T51 708 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 OR2AG1Q9H205 316 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 CCDC86Q9H6F5 360 aaKnown RBP13.61□□□□□ -0.23
TPM4-202ENST00000344824 TREX1Q9NSU2 369 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 TRNAU1APQ9NX07 287 aaKnown RBP13.61□□□□□ -0.23
TPM4-202ENST00000344824 FKBPLQ9UIM3 349 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 RABGEF1Q9UJ41 708 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 ZMIZ1Q9ULJ6 1067 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 PCDHB1Q9Y5F3 818 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 AK5Q9Y6K8 562 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 FAM169AQ9Y6X4 670 aa13.61□□□□□ -0.23
TPM4-202ENST00000344824 EXOC1LA0A1B0GW35 172 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 TMEM8BA6NDV4 472 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 CASC3O15234 703 aaKnown RBP13.6□□□□□ -0.23
TPM4-202ENST00000344824 NOBOXO60393 691 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 CSO75390 466 aaKnown RBP13.6□□□□□ -0.23
TPM4-202ENST00000344824 SASH3O75995 380 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 ACP5P13686 325 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 PDE1BQ01064 536 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 CYP4F3Q08477 520 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 SPIDRQ14159 915 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 KBTBD12Q3ZCT8 623 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 C14orf28Q4W4Y0 310 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 HSP90AA5PQ58FG0 334 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 KIAA0930Q6ICG6 404 aaPredicted RBP13.6□□□□□ -0.23
TPM4-202ENST00000344824 NLRP8Q86W28 1048 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 NRROSQ86YC3 692 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 PPM1NQ8N819 430 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 GPBAR1Q8TDU6 330 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 EPS8L3Q8TE67 593 aaKnown RBP13.6□□□□□ -0.23
TPM4-202ENST00000344824 PATE1Q8WXA2 126 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 GLYATL1Q969I3 302 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 NXPE2Q96DL1 559 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 OSGEPL1Q9H4B0 414 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 SMYD2Q9NRG4 433 aa13.6□□□□□ -0.23
TPM4-202ENST00000344824 IARS2Q9NSE4 1012 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms