RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 LIPCP11150 499 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 RAB15P59190 212 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 XIAPP98170 497 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 C16orf72Q14CZ0 275 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 BCL7AQ4VC05 210 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 NKAIN2Q5VXU1 208 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 DRICH1Q6PGQ1 229 aaPredicted RBP13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 TMEM220Q6QAJ8 160 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 C4orf22Q6V702 233 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 TMEM26Q6ZUK4 368 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 GPR155Q7Z3F1 870 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 SNX20Q7Z614 316 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 STYXQ8WUJ0 223 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 SNRNP27Q8WVK2 155 aaKnown RBP13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 CXorf40BQ96DE9 158 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 DCUN1D1Q96GG9 259 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 NAF1Q96HR8 494 aaKnown RBP13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 LINC00615Q96LM1 132 aaPredicted RBP13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 FCRL3Q96P31 734 aaPredicted RBP13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 DDA1Q9BW61 102 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 HOMER3Q9NSC5 361 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 ACSL5Q9ULC5 683 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZNF148Q9UQR1 794 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 PCDHGA3Q9Y5H0 932 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 SLC30A1Q9Y6M5 507 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 MN1Q10571 1320 aaPredicted RBP13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 MGAT4DA6NG13 374 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 B4E171 279 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 TOX3O15405 576 aaPredicted RBP13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 POP7O75817 140 aaKnown RBP13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 SUN1O94901 812 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 GSTM1P09488 218 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 HGFP14210 728 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 SLC19A1P41440 591 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 TSPAN7P41732 249 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 CTSCP53634 463 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 CCZ1BP86790 482 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 CCZ1P86791 482 aaPredicted RBP13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 GSTM4Q03013 218 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 CFHR1Q03591 330 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 CDH17Q12864 832 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 OLIG2Q13516 323 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 SPARCL1Q14515 664 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 PTPRCAPQ14761 206 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 SEPT7Q16181 437 aaKnown RBP13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 CCNG2Q16589 344 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZNF761Q86XN6 746 aaPredicted RBP13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 NXPE1Q8N323 547 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 CCDC89Q8N998 374 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 RCBTB1Q8NDN9 531 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 OR13C4Q8NGS5 318 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZFPM2Q8WW38 1151 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 TEFMQ96QE5 360 aaKnown RBP13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 TAAR9Q96RI9 348 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 UBL7Q96S82 380 aaPredicted RBP13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 COPS8Q99627 209 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 ASPSCR1Q9BZE9 553 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 VPS37BQ9H9H4 285 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 SLC40A1Q9NP59 571 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 NLE1Q9NVX2 485 aaPredicted RBP13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 PAK5Q9P286 719 aa13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZNF624Q9P2J8 865 aaPredicted RBP13.09□□□□□ -0.31
SIRPB3P-201ENST00000340424 PTPRQQ9UMZ3 2332 aa13.08□□□□□ -0.31
SIRPB3P-201ENST00000340424 PRAMEF33A0A0G2JMD5 474 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 OR2AG2A6NM03 316 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 E7EVH7 732 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 GPR39O43194 453 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 PRAMEF10O60809 474 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 UBXN7O94888 489 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 IFNB1P01574 187 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 ANKRD34CP0C6C1 535 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 BRAFP15056 766 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 ITIH1P19827 911 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 PSMA3P25788 255 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 RPL10P27635 214 aaKnown RBP13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 LMAN1P49257 510 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 MAPK10P53779 464 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 DRG2P55039 364 aaKnown RBP13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 CXADRP78310 365 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 CLN3Q13286 438 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 SKIDA1Q1XH10 827 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 FNBP1LQ5T0N5 605 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 METRNLQ641Q3 311 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 KLHL35Q6PF15 583 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 ARHGAP22Q7Z5H3 698 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 LSM14AQ8ND56 463 aaKnown RBP13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 OR2L2Q8NH16 312 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 NCSTNQ92542 709 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 USP7Q93009 1102 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 ZPBPQ9BS86 351 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 SCHIP1Q9P0W5 487 aaPredicted RBP13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 DRG1Q9Y295 367 aaKnown RBP13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 PPP2R2CQ9Y2T4 447 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 KCTD3Q9Y597 815 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 PCDHB11Q9Y5F2 797 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 IGSF10Q6WRI0 2623 aa13.08□□□□□ -0.32
SIRPB3P-201ENST00000340424 SMG1Q96Q15 3661 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms