RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 CD3EAPO15446 510 aaKnown RBP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 LPOP22079 712 aaPredicted RBP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 CCR10P46092 362 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 ZNF517Q6ZMY9 492 aaPredicted RBP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 GRAMD2AQ8IUY3 354 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 DENND1CQ8IV53 801 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 CCDC185Q8N715 623 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 IFRD1O00458 451 aaPredicted RBP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 TLR5O60602 858 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 CFHP08603 1231 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 HLCSP50747 726 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 BRMS1LQ5PSV4 323 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 AGAP7PQ5VUJ5 663 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 AFTPHQ6ULP2 937 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 ZNF567Q8N184 647 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 OR4L1Q8NH43 312 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 SPATA22Q8NHS9 363 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 QKIQ96PU8 341 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■■■■□ 26.5
NPHP3-201ENST00000337331 GFM1Q96RP9 751 aaKnown RBP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 TMEM106CQ9BVX2 250 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 YTHDF1Q9BYJ9 559 aaKnown RBP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 GMIPQ9P107 970 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 TMEM233B4DJY2 109 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 H3BMM5 538 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 TPPPO94811 219 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 VNN1O95497 513 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 CD36P16671 472 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 MATN1P21941 496 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 GRIA1P42261 906 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 ARL4DP49703 201 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 LIMK2P53671 638 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 TPRG1LQ5T0D9 272 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 DESI1Q6ICB0 168 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 ADAMTSL2Q86TH1 951 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 MON1AQ86VX9 555 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 PPP3R2Q96LZ3 170 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 CHCHD6Q9BRQ6 235 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 CNOT11Q9UKZ1 510 aaKnown RBP15.91■□□□□ 0.14
NPHP3-201ENST00000337331 CNTNAP1P78357 1384 aa15.91■□□□□ 0.14
NPHP3-201ENST00000337331 AP2A1O95782 977 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 PTPN9P43378 593 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 ATP6V0D1P61421 351 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 PSMD5Q16401 504 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 SLC10A6Q3KNW5 377 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 DUSP28Q4G0W2 176 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 ARMC6Q6NXE6 501 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 CASP12Q6UXS9 341 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 OOSP2Q86WS3 158 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 CACUL1Q86Y37 369 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 NACC2Q96BF6 587 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 TOPAZ1Q8N9V7 1692 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 SNNO75324 88 aaPredicted RBP15.9■□□□□ 0.14
NPHP3-201ENST00000337331 FGF1P05230 155 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 ZBTB48P10074 688 aaPredicted RBP15.9■□□□□ 0.14
NPHP3-201ENST00000337331 PSKH1P11801 424 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 ATXN1P54253 815 aaKnown RBP15.9■□□□□ 0.14
NPHP3-201ENST00000337331 AIF1P55008 147 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 ZNF57Q68EA5 555 aaPredicted RBP15.9■□□□□ 0.14
NPHP3-201ENST00000337331 LDB1Q86U70 411 aaPredicted RBP15.9■□□□□ 0.14
NPHP3-201ENST00000337331 NATD1Q8N6N6 113 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 C10orf53Q8N6V4 93 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 OR9I1Q8NGQ6 314 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 OR5H6Q8NGV6 325 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 PPTC7Q8NI37 304 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 CPNE5Q9HCH3 593 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 KLHL28Q9NXS3 571 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 DNMT3LQ9UJW3 386 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 DERAQ9Y315 318 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 NR2E3Q9Y5X4 410 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 MEN1O00255 615 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 IPO13O94829 963 aaKnown RBP15.9■□□□□ 0.14
NPHP3-201ENST00000337331 LRIG2O94898 1065 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 PCDH8O95206 1070 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 CKBP12277 381 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 MTHFRP42898 656 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 SKIV2LQ15477 1246 aaKnown RBP15.9■□□□□ 0.14
NPHP3-201ENST00000337331 FSTL4Q6MZW2 842 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 DCLRE1AQ6PJP8 1040 aa15.9■□□□□ 0.14
NPHP3-201ENST00000337331 SLC15A1P46059 708 aa15.89■□□□□ 0.14
NPHP3-201ENST00000337331 AHSA2Q719I0 299 aa15.89■□□□□ 0.14
NPHP3-201ENST00000337331 KCNS3Q9BQ31 491 aa15.89■□□□□ 0.14
NPHP3-201ENST00000337331 TUBA1CQ9BQE3 449 aa15.89■□□□□ 0.14
NPHP3-201ENST00000337331 TESMINQ9Y4I5 508 aa15.89■□□□□ 0.14
NPHP3-201ENST00000337331 CNTRLQ7Z7A1 2325 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 GCATO75600 419 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 ZNF26P17031 533 aaPredicted RBP15.89■□□□□ 0.13
NPHP3-201ENST00000337331 GLDCP23378 1020 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 UQCRC1P31930 480 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 POLD2P49005 469 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 PLA2G16P53816 162 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 POLR2LP62875 67 aaKnown RBP15.89■□□□□ 0.13
NPHP3-201ENST00000337331 ZNF605Q86T29 641 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 ASB12Q8WXK4 309 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 TFAP2CQ92754 450 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 TOP1MTQ969P6 601 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 LINGO1Q96FE5 620 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 ZCCHC2Q9C0B9 1178 aaKnown RBP15.89■□□□□ 0.13
NPHP3-201ENST00000337331 ZBTB26Q9HCK0 441 aa15.89■□□□□ 0.13
NPHP3-201ENST00000337331 H0YJX3 145 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms