RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 ZBTB11O95625 1053 aaPredicted RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 VIPP01282 170 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 CCL4P13236 92 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 WT1P19544 449 aaPredicted RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 HSD11B2P80365 405 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 SRSF1Q07955 248 aaKnown RBP eCLIP6.25□□□□□ -1.41
USP16-201ENST00000334352 GBX1Q14549 363 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 ATP13A4Q4VNC1 1196 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 LACTB2Q53H82 288 aaPredicted RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 DNAJC21Q5F1R6 531 aaKnown RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 ZNF789Q5FWF6 425 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 PHF19Q5T6S3 580 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 CERS6Q6ZMG9 384 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 RFLNAQ6ZTI6 216 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 RASGEF1AQ8N9B8 481 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 Q8N9G6 341 aaPredicted RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 ACVR1CQ8NER5 493 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 C9orf43Q8TAL5 461 aaPredicted RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 SLC35B2Q8TB61 432 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 ZNF501Q96CX3 271 aaPredicted RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 AHCYL2Q96HN2 611 aaKnown RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 SMAD5Q99717 465 aaKnown RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 TRIM56Q9BRZ2 755 aaKnown RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 SPATA16Q9BXB7 569 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 PACSIN1Q9BY11 444 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 LRRC40Q9H9A6 602 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 SCHIP1Q9P0W5 487 aaPredicted RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 DRG1Q9Y295 367 aaKnown RBP6.25□□□□□ -1.41
USP16-201ENST00000334352 TMEM98Q9Y2Y6 226 aa6.25□□□□□ -1.41
USP16-201ENST00000334352 VPS13AQ96RL7 3174 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.24□□□□□ -1.41
USP16-201ENST00000334352 WIPF3A6NGB9 483 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 C2orf81A6NN90 581 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 SLC25A14O95258 325 aaPredicted RBP6.24□□□□□ -1.41
USP16-201ENST00000334352 CAPN1P07384 714 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 FDFT1P37268 417 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 CETN2P41208 172 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 PLCL1Q15111 1095 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 TMTC4Q5T4D3 741 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 UNC5DQ6UXZ4 953 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 RFX6Q8HWS3 928 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 FBXO15Q8NCQ5 510 aaPredicted RBP6.24□□□□□ -1.41
USP16-201ENST00000334352 FLVCR1-AS1Q8TAF5 88 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 P3H4Q92791 437 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 OXNAD1Q96HP4 312 aaPredicted RBP6.24□□□□□ -1.41
USP16-201ENST00000334352 GPR63Q9BZJ6 419 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 SEMA4CQ9C0C4 833 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 SLC23A2Q9UGH3 650 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 PKP3Q9Y446 797 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 PLEKHM1Q9Y4G2 1056 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 HEMK1Q9Y5R4 338 aaPredicted RBP6.24□□□□□ -1.41
USP16-201ENST00000334352 KCNMB2Q9Y691 235 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 NCOR2Q9Y618 2525 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 PTPRZ1P23471 2315 aaPredicted RBP6.24□□□□□ -1.41
USP16-201ENST00000334352 SYCE3A1L190 88 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 LRRD1A4D1F6 860 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 AKR1B10O60218 316 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 CPNE3O75131 537 aaKnown RBP6.24□□□□□ -1.41
USP16-201ENST00000334352 RFPL1O75677 317 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 TJP3O95049 919 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 NDUFA10O95299 355 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 RALBP11234 206 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 CD9P21926 228 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 ACADLP28330 430 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 PTPN4P29074 926 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 STIP1P31948 543 aaKnown RBP6.24□□□□□ -1.41
USP16-201ENST00000334352 CACNG1Q06432 222 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 ATP13A5Q4VNC0 1218 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 ANKS6Q68DC2 871 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 RPUSD3Q6P087 351 aaKnown RBP6.24□□□□□ -1.41
USP16-201ENST00000334352 SLC30A9Q6PML9 568 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 NXPE1Q8N323 547 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 OR2AG1Q9H205 316 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 WDR54Q9H977 334 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 KLC4Q9NSK0 619 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 SLC30A1Q9Y6M5 507 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 AP1M2Q9Y6Q5 423 aa6.24□□□□□ -1.41
USP16-201ENST00000334352 MAP1BP46821 2468 aaKnown RBP6.24□□□□□ -1.41
USP16-201ENST00000334352 EIF3FO00303 357 aaPredicted RBP6.23□□□□□ -1.41
USP16-201ENST00000334352 POLR1CO15160 346 aaPredicted RBP6.23□□□□□ -1.41
USP16-201ENST00000334352 INPP4BO15327 924 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 LDB2O43679 373 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 CREG1O75629 220 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 SRP72O76094 671 aaKnown RBP6.23□□□□□ -1.41
USP16-201ENST00000334352 AP2A1O95782 977 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 ALBP02768 609 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 ERGP11308 486 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 ITIH1P19827 911 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 NFKB1P19838 968 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 ACRV1P26436 265 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 MAGEA1P43355 309 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 NFATC2Q13469 925 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 MESDQ14696 234 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 INAQ16352 499 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 LONRF2Q1L5Z9 754 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 GPRC6AQ5T6X5 926 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 NEK10Q6ZWH5 1172 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 PCGF5Q86SE9 256 aa6.23□□□□□ -1.41
USP16-201ENST00000334352 OOSP2Q86WS3 158 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms